CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56901	Soybean	nucleus	87.29	91.42
VIT_17s0000g06340.t01	Wine grape	nucleus	59.32	56.0
PGSC0003DMT400050265	Potato	nucleus	22.03	54.93
GSMUA_Achr11P...	Banana	nucleus	34.46	53.51
GSMUA_Achr3P24170_001	Banana	nucleus	50.56	50.14
KRH50568	Soybean	nucleus	48.31	48.58
GSMUA_Achr2P01740_001	Banana	nucleus	46.05	47.8
KXG29049	Sorghum	nucleus	51.13	47.76
KRG89584	Soybean	nucleus	47.46	45.41
HORVU4Hr1G032440.7	Barley	nucleus	48.02	43.93
TraesCS4B01G150200.1	Wheat	nucleus	48.02	43.7
TraesCS4D01G147000.1	Wheat	nucleus	47.74	43.44
TraesCS4A01G169000.1	Wheat	nucleus	47.46	43.41
Os11t0658700-01	Rice	nucleus	48.02	43.37
Bra031049.1-P	Field mustard	nucleus	46.33	42.93
Bra025685.1-P	Field mustard	nucleus	44.63	41.69
Bra016544.1-P	Field mustard	nucleus	35.88	41.5
AT1G18750.3	Thale cress	nucleus	46.33	39.71
KRH70750	Soybean	nucleus	23.16	36.28
KRH74891	Soybean	endoplasmic reticulum, golgi, mitochondrion, vacuole	38.7	35.58
CDY26727	Canola	extracellular	19.77	33.49
Solyc03g115910.1.1	Tomato	plastid	38.14	32.37
Zm00001d048697_P003	Maize	nucleus, plasma membrane, plastid	35.88	25.87
KRH18859	Soybean	nucleus	23.16	24.55
KRH16660	Soybean	nucleus	23.73	24.21
KRH61376	Soybean	nucleus	21.47	23.38
CDY64870	Canola	nucleus	14.69	21.85

Protein Annotations

EntrezGene:100811765	MapMan:15.5.14	Gene3D:3.40.1810.10	EMBL:ACUP02010348	ncoils:Coil	EnsemblPlantsGene:GLYMA_17G101300
GO:GO:0000982	GO:GO:0000987	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045944	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879	UniProt:K7MKW8
EnsemblPlants:KRH03491	ProteinID:KRH03491	ProteinID:KRH03491.1	InterPro:MADS_SRF-like	PFAM:PF00319	PRINTS:PR00404
PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF156	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_MADSbox
InterPro:TF_MADSbox_sf	UniParc:UPI0002967B95	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:7951772..7956449

Molecular Weight (calculated)

40412.2 Da

IEP (calculated)

6.794

GRAVY (calculated)

-0.619

Length

354 amino acids

Sequence
(BLAST)

001: MGRVKLKIKK LESISNRHVT YSKRKSGIIK KAKELSILCD IDIILLMFSP TGKPTLLQGE RSNIEEVIAK FAQLSPQERA KRKMESLEAL KKTFKKLDHD
101: VKIQDFLGSS SQTMEELSHQ VKVLQAHITE VQQRLSYWNN LEKINNLEHL RQMEDSLRES INRVSLQKEN LGKHQLISLE CANQLQEGMT LPLMMTSLQE
201: SQPLSWLLNN DNHQLMLPNE PKFLSFSDNT NRDVECSTDI SLPNYFGHIG SNKLEVGSSP QVTTMGQGGG TMNELNGTTY LNVQHCDQFA YPPPPDIEEV
301: KHFPSMDNKS NIVDYQVNNN FDLPRSLFEN GHQFWNSASG SCGIAMYNEN DYHR

Best Arabidopsis Sequence Match ( AT1G18750.4 )
(BLAST)

001: MGRVKLKIKR LESTSNRQVT YTKRKNGILK KAKELSILCD IDIVLLMFSP TGRATAFHGE HSCIEEVISK FAQLTPQERT KRKLESLEAL KKTFKKLDHD
101: VNIHDFLGAR NQTIEGLSNQ VAIYQAQLME CHRRLSCWTN IDRIENTEHL DLLEESLRKS IERIQIHKEH YRKNQLLPIE CATTQFHSGI QLPMAMGGNS
201: SMQEAHSMSW LPDNDHQQTI LPGDSSFLPH REMDGSIPVY SSCFFESTKP EDQICSNPGQ QFEQLEQQGN GCLGLQQLGE EYSYPTPFGT TLGMEEDQEK
301: KIKSEMELNN LQQQQQQQQQ QQQQDPSMYD PMANNNGGCF QIPHDQSMFV NDHHHHHHHH HQNWVPDSMF GQTSYNQQPN

Arabidopsis Description

AGL65AGAMOUS-like 65 [Source:TAIR;Acc:AT1G18750]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.