Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26732 | Canola | nucleus | 67.65 | 42.82 |
| CDY58993 | Canola | nucleus | 62.6 | 39.31 |
| CDY26727 | Canola | extracellular | 32.35 | 36.84 |
| CDX96703 | Canola | nucleus | 63.45 | 34.63 |
| CDX83816 | Canola | nucleus | 62.18 | 28.57 |
| GSMUA_Achr2P01740_001 | Banana | nucleus | 21.85 | 15.25 |
| GSMUA_Achr3P24170_001 | Banana | nucleus | 22.27 | 14.85 |
| KRH56901 | Soybean | nucleus | 21.01 | 14.79 |
| KRH03491 | Soybean | nucleus | 21.85 | 14.69 |
| KXG29049 | Sorghum | nucleus | 21.85 | 13.72 |
| Os11t0658700-01 | Rice | nucleus | 21.01 | 12.76 |
| HORVU4Hr1G032440.7 | Barley | nucleus | 20.59 | 12.66 |
| TraesCS4B01G150200.1 | Wheat | nucleus | 20.59 | 12.6 |
| TraesCS4D01G147000.1 | Wheat | nucleus | 20.59 | 12.6 |
| TraesCS4A01G169000.1 | Wheat | nucleus | 19.75 | 12.14 |
| GSMUA_Achr11P... | Banana | nucleus | 10.5 | 10.96 |
| CDY45183 | Canola | nucleus | 16.81 | 10.61 |
| CDY03021 | Canola | nucleus | 17.23 | 10.46 |
| CDY60833 | Canola | nucleus | 17.65 | 9.91 |
| CDX95922 | Canola | mitochondrion | 15.13 | 9.86 |
| Zm00001d048697_P003 | Maize | nucleus, plasma membrane, plastid | 18.49 | 8.96 |
| CDY17422 | Canola | nucleus | 18.07 | 8.76 |
| CDY40939 | Canola | golgi, mitochondrion, plasma membrane, plastid | 14.71 | 8.39 |
| CDY41491 | Canola | nucleus | 10.08 | 7.1 |
| CDY00423 | Canola | nucleus | 9.66 | 6.87 |
| CDX91664 | Canola | nucleus | 9.66 | 6.8 |
| CDY01295 | Canola | nucleus | 8.82 | 6.75 |
| CDY24740 | Canola | nucleus | 1.68 | 6.25 |
| CDX76715 | Canola | nucleus | 1.68 | 6.25 |
| CDX88402 | Canola | nucleus | 7.98 | 5.78 |
| CDY11489 | Canola | nucleus | 2.1 | 5.62 |
| CDX87489 | Canola | nucleus | 7.56 | 5.47 |
| CDX87492 | Canola | nucleus | 4.62 | 4.8 |
| CDX76717 | Canola | nucleus | 3.36 | 4.52 |
| CDX88401 | Canola | nucleus | 4.62 | 4.51 |
| CDX76718 | Canola | nucleus | 1.68 | 4.35 |
| CDX69305 | Canola | nucleus | 3.36 | 3.94 |
| CDX76713 | Canola | nucleus | 1.68 | 2.72 |
Protein Annotations
| EnsemblPlants:CDY64870 | EnsemblPlantsGene:GSBRNA2T00043764001 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF156 | ProteinID:CDY64870 | ProteinID:CDY64870.1 |
| SEG:seg | UniParc:UPI0004EEDC73 | UniProt:A0A078JEL0 | MapMan:35.1 | : | : |
Description
BnaC05g50150DBnaC05g50150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEL0]
Coordinates
chrLK034582:-:3516..4381
Molecular Weight (calculated)
27410.1 Da
IEP (calculated)
4.933
GRAVY (calculated)
-0.771
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MHGLNAFLRS LRVEALSENK ASIYIAKESA KALKNKDHKV MGDNNTMQEA HSMSWPPDKD NQQTILPGDS SFLPHREMDG LLPDYSNCFF ESVKQEDQKR
101: SIPGEQVEQL EQQGDGCLGF QQIGEEYSYP TPFGTTLGME KDHEKKIKTG MEWNNLQQQQ QQQQDPSSMF DPTASSSVCF QIPPDQPMFA TDLHYHQNWV
201: SGSMFGQTSY NQVCVFHTLH WNYLWLYDPP KVMSLYLW
101: SIPGEQVEQL EQQGDGCLGF QQIGEEYSYP TPFGTTLGME KDHEKKIKTG MEWNNLQQQQ QQQQDPSSMF DPTASSSVCF QIPPDQPMFA TDLHYHQNWV
201: SGSMFGQTSY NQVCVFHTLH WNYLWLYDPP KVMSLYLW
001: MNFLGYFLIS LSQIAKVCVN ITTRQGLSNQ VAIYQAQLME CHRRLSCWTN IDRIENTEHL DLLEESLRKS IERIQIHKEH YRKNQLLPIE CATTQFHSGI
101: QLPMAMGGNS SMQEAHSMSW LPDNDHQQTI LPGDSSFLPH REMDGSIPVY SSCFFESTKP EDQICSNPGQ QFEQLEQQGN GCLGLQQLGE EYSYPTPFGT
201: TLGMEEDQEK KIKSEMELNN LQQQQQQQQQ QQQQDPSMYD PMANNNGGCF QIPHDQSMFV NDHHHHHHHH HQNWVPDSMF GQTSYNQQPN
101: QLPMAMGGNS SMQEAHSMSW LPDNDHQQTI LPGDSSFLPH REMDGSIPVY SSCFFESTKP EDQICSNPGQ QFEQLEQQGN GCLGLQQLGE EYSYPTPFGT
201: TLGMEEDQEK KIKSEMELNN LQQQQQQQQQ QQQQDPSMYD PMANNNGGCF QIPHDQSMFV NDHHHHHHHH HQNWVPDSMF GQTSYNQQPN
Arabidopsis Description
AGL65AGAMOUS-like 65 [Source:TAIR;Acc:AT1G18750]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.