Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007239.1-P | Field mustard | cytosol | 62.72 | 63.0 |
| CDY27222 | Canola | cytosol | 62.72 | 63.0 |
| CDX72144 | Canola | endoplasmic reticulum | 59.65 | 56.2 |
| AT3G56350.1 | Thale cress | extracellular | 59.21 | 56.02 |
| VIT_13s0067g02990.t01 | Wine grape | mitochondrion, plastid | 67.11 | 54.06 |
| VIT_16s0013g00260.t01 | Wine grape | plastid | 32.02 | 23.86 |
| VIT_10s0042g00100.t01 | Wine grape | mitochondrion | 27.19 | 19.31 |
Protein Annotations
| Gene3D:1.10.287.990 | MapMan:10.2.2.2 | EntrezGene:100258671 | wikigene:100258671 | Gene3D:2.40.500.20 | ProteinID:CBI15826 |
| ProteinID:CBI15826.3 | UniProt:D7SJK0 | EMBL:FN594951 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004784 | GO:GO:0005488 | GO:GO:0006801 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009791 | GO:GO:0009838 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010227 |
| GO:GO:0016491 | GO:GO:0019430 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036314 | InterPro:IPR036324 |
| EntrezGene:LOC100258671 | wikigene:LOC100258671 | InterPro:Mn/Fe_SOD | InterPro:Mn/Fe_SOD_C | InterPro:Mn/Fe_SOD_N | InterPro:Mn/Fe_SOD_N_sf |
| PFAM:PF00081 | PFAM:PF02777 | PIRSF:PIRSF000349 | PRINTS:PR01703 | PANTHER:PTHR11404 | PANTHER:PTHR11404:SF6 |
| InterPro:SOD_C_sf | SUPFAM:SSF46609 | SUPFAM:SSF54719 | UniParc:UPI00015C80B6 | ArrayExpress:VIT_06s0004g07950 | EnsemblPlantsGene:VIT_06s0004g07950 |
| EnsemblPlants:VIT_06s0004g07950.t01 | RefSeq:XP_002276583 | RefSeq:XP_002276583.2 | SEG:seg | : | : |
Description
Superoxide dismutase [Source:UniProtKB/TrEMBL;Acc:D7SJK0]
Coordinates
chr6:-:8686646..8687855
Molecular Weight (calculated)
25616.8 Da
IEP (calculated)
7.972
GRAVY (calculated)
-0.358
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMSPLTLDR NSLGRGQRLG QVQALKTFSL PDLPYDYRAL EPLVSGEIME LHHLKHHLTY ITNYYKALHQ LDEAISKGDS SSILRLQSSI KFNGGGHINH
101: SIFRKNLAPV IEGGGEPPNG LLGVAFHSSY GSLEALMQKI NAEGAALQGS GWVWLALDKE MKRLQIETTQ NQDPLVTKGP NLVPLLGIDV WEHAYNLQYK
201: NVKADYLKNI WKVMNWKYAS ELYEKESA
101: SIFRKNLAPV IEGGGEPPNG LLGVAFHSSY GSLEALMQKI NAEGAALQGS GWVWLALDKE MKRLQIETTQ NQDPLVTKGP NLVPLLGIDV WEHAYNLQYK
201: NVKADYLKNI WKVMNWKYAS ELYEKESA
001: MAIRCVASRK TLAGLKETSS RLLRIRGIQT FTLPDLPYDY GALEPAISGE IMQIHHQKHH QAYVTNYNNA LEQLDQAVNK GDASTVVKLQ SAIKFNGGGH
101: VNHSIFWKNL APSSEGGGEP PKGSLGSAID AHFGSLEGLV KKMSAEGAAV QGSGWVWLGL DKELKKLVVD TTANQDPLVT KGGSLVPLVG IDVWEHAYYL
201: QYKNVRPEYL KNVWKVINWK YASEVYEKEN N
101: VNHSIFWKNL APSSEGGGEP PKGSLGSAID AHFGSLEGLV KKMSAEGAAV QGSGWVWLGL DKELKKLVVD TTANQDPLVT KGGSLVPLVG IDVWEHAYYL
201: QYKNVRPEYL KNVWKVINWK YASEVYEKEN N
Arabidopsis Description
MSD1Superoxide dismutase [Mn] 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O81235]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.