Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- mitochondrion 4
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19612 | Sorghum | cytosol | 28.03 | 36.31 |
| Zm00001d038292_P004 | Maize | nucleus | 29.45 | 33.88 |
| TraesCS1B01G285600.1 | Wheat | cytosol, golgi, nucleus | 25.89 | 32.54 |
| TraesCS1D01G275900.1 | Wheat | cytosol, golgi, nucleus | 25.89 | 32.54 |
| TraesCS1A01G276400.1 | Wheat | cytosol, golgi, nucleus | 25.65 | 32.24 |
| Os05t0443700-01 | Rice | cytosol | 25.18 | 31.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.15 | 16.08 |
| VIT_08s0007g03310.t01 | Wine grape | cytosol | 14.25 | 13.45 |
| Zm00001d024418_P004 | Maize | cytosol | 8.08 | 9.21 |
| Zm00001d028054_P002 | Maize | cytosol | 6.89 | 7.47 |
Protein Annotations
| EnsemblPlants:Zm00001d019814_P001 | EnsemblPlants:Zm00001d019814_T001 | EnsemblPlantsGene:Zm00001d019814 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016192 | GO:GO:0048193 | InterPro:SNARE | InterPro:Syntaxin-6_N | PANTHER:PTHR34949 |
| PANTHER:PTHR34949:SF2 | PFAM:PF09177 | ProteinID:ONM53754.1 | SEG:seg | SUPFAM:SSF47661 | UniParc:UPI000844CE91 |
| UniProt:A0A1D6I0F0 | MapMan:35.2 | : | : | : | : |
Description
Syntaxin/t-SNARE family protein
Coordinates
chr7:-:64605999..64622652
Molecular Weight (calculated)
43609.5 Da
IEP (calculated)
10.979
GRAVY (calculated)
-0.828
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRAARGGR AGRGWPGGRG GRAGRRGGAG GRARAKPAGA GTLGQARDHV GADTTRSRHG GATGPGRLNR PGAAELAGRR AAEPGAGRAQ GPSGSPGNRA
101: GGAERARPGS PGAGPSRTRE GEGRLAGGAA GRGGGLVTGG GAEGRGQAGA GSPERGRGGR ARGVGAGEGG ARPGGVGRAG GAGAAERGRG GRAGRRGGTG
201: GRAGAEPGGE VWGVSCTFGG GEIDHSQWFM INTMEHKDLD RMEGVYRLLL HERKLMQDVT SDAKFHAPIQ YERDVFTALG TTKWQLEQFE REVNAAAFSD
301: KSKSRENAIL KFRQFIRAIA DQISQVEESL ESLRLGSSRT QKHLYSSEHD GDGLASFLSG PSSKDDHAYH STGTDEIVEL KLDNVTLVNG YHSTQEHTTY
401: EHRNSDKDLE GQLISRWSGR T
101: GGAERARPGS PGAGPSRTRE GEGRLAGGAA GRGGGLVTGG GAEGRGQAGA GSPERGRGGR ARGVGAGEGG ARPGGVGRAG GAGAAERGRG GRAGRRGGTG
201: GRAGAEPGGE VWGVSCTFGG GEIDHSQWFM INTMEHKDLD RMEGVYRLLL HERKLMQDVT SDAKFHAPIQ YERDVFTALG TTKWQLEQFE REVNAAAFSD
301: KSKSRENAIL KFRQFIRAIA DQISQVEESL ESLRLGSSRT QKHLYSSEHD GDGLASFLSG PSSKDDHAYH STGTDEIVEL KLDNVTLVNG YHSTQEHTTY
401: EHRNSDKDLE GQLISRWSGR T
001: MTTSLDRWEK DPFFPAAEEV QESADRMESA YRTWLNGKRD SSKVWDSEQL HRDLHAALGT TKWQLDEFQK AVKSSYDNRL SDETRDRHRE FTFVMEAQVS
101: KIEKSLKEAA QSDGKGTPRW VRLDEDDRNE LALFLTGPSE SAKANPNGHR RTASAAEFSA WNIAVSDDGL VKKSCDEPVV RPPRKVPSFS GFLNYMDPVS
201: KHCNRKWKGL DRQGDSDAAL LPIQANQQDM NGCSERGKSC MECEEDCYEK QLHGWYGALQ RQLQRSQYRM RYSKSVHAAI WIILLVFLIV VVAVHSM
101: KIEKSLKEAA QSDGKGTPRW VRLDEDDRNE LALFLTGPSE SAKANPNGHR RTASAAEFSA WNIAVSDDGL VKKSCDEPVV RPPRKVPSFS GFLNYMDPVS
201: KHCNRKWKGL DRQGDSDAAL LPIQANQQDM NGCSERGKSC MECEEDCYEK QLHGWYGALQ RQLQRSQYRM RYSKSVHAAI WIILLVFLIV VVAVHSM
Arabidopsis Description
At1g27700/T22C5_14 [Source:UniProtKB/TrEMBL;Acc:Q940U5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.