Factsheet for Os05t0443700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G285600.1	Wheat	cytosol, golgi, nucleus	67.76	67.76
TraesCS1A01G276400.1	Wheat	cytosol, golgi, nucleus	66.57	66.57
TraesCS1D01G275900.1	Wheat	cytosol, golgi, nucleus	66.57	66.57
Zm00001d038292_P004	Maize	nucleus	70.45	64.48
EES19612	Sorghum	cytosol	57.91	59.69
Zm00001d019814_P001	Maize	mitochondrion	31.64	25.18
GSMUA_AchrUn_...	Banana	nucleus	30.75	24.35
VIT_08s0007g03310.t01	Wine grape	cytosol	31.04	23.32
Os08t0244100-01	Rice	cytosol, golgi, nucleus	11.04	10.25
Os03t0207200-01	Rice	cytosol	10.75	9.89
Os10t0343100-01	Rice	cytosol	10.45	9.54

Protein Annotations

MapMan:35.2	EntrezGene:4338931	ProteinID:AAU90105.1	ProteinID:AAV24968.1	EMBL:AK071068	ProteinID:BAF17590.1
ProteinID:BAS94264.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0006091	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	GO:GO:0022900	GO:GO:0048193	GO:GO:0051536
GO:GO:0051537	EnsemblPlantsGene:Os05g0443700	EnsemblPlants:Os05t0443700-01	PFAM:PF09177	PANTHER:PTHR34949	PANTHER:PTHR34949:SF2
UniProt:Q60DE9	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin-6_N	TMHMM:TMhelix	UniParc:UPI0000444800
RefSeq:XP_015639073.1	SEG:seg	:	:	:	:

Description

OsSTA150Syntaxin 6, N-terminal domain containing protein. (Os05t0443700-01)

Coordinates

chr5:-:21708483..21711661

Molecular Weight (calculated)

38240.1 Da

IEP (calculated)

8.100

GRAVY (calculated)

-0.659

Length

335 amino acids

Sequence
(BLAST)

001: MAEGFGRWEA DPLFPAAECV QDSADRMEGV YRLLLHERKL IQDDTSHTKR RVSMQYERDV CTALGTTKWQ LEQFEREVNA AALSNKSNSR ENAILQFRQF
101: IRAIAEQISQ VEDSLESLRN DSIRTPKHSY LTEHDGDELA SFLSGSNRKD NHVIYSTGTD EIVELKLDSV PAVNGYHSTQ ERTSCEFRYS GEDVEGAAKP
201: QCSCGENACE GDHNGSSMRG LDSDDSIGRK HHFRSKLSRK YHSFMRNLWF TNRGRESFTK RRKDGEVMDS LRNGSTLPSF NLPPAGRAMY FWPELIKRRL
301: SKFKCSTHHK HLQVRLATVL LIALAVLGLL VLHVR

Best Arabidopsis Sequence Match ( AT1G27700.1 )
(BLAST)

001: MTTSLDRWEK DPFFPAAEEV QESADRMESA YRTWLNGKRD SSKVWDSEQL HRDLHAALGT TKWQLDEFQK AVKSSYDNRL SDETRDRHRE FTFVMEAQVS
101: KIEKSLKEAA QSDGKGTPRW VRLDEDDRNE LALFLTGPSE SAKANPNGHR RTASAAEFSA WNIAVSDDGL VKKSCDEPVV RPPRKVPSFS GFLNYMDPVS
201: KHCNRKWKGL DRQGDSDAAL LPIQANQQDM NGCSERGKSC MECEEDCYEK QLHGWYGALQ RQLQRSQYRM RYSKSVHAAI WIILLVFLIV VVAVHSM

Arabidopsis Description

At1g27700/T22C5_14 [Source:UniProtKB/TrEMBL;Acc:Q940U5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.