Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018613.1-P | Field mustard | nucleus | 85.37 | 85.37 |
| CDX93551 | Canola | nucleus | 84.55 | 83.87 |
| Bra031633.1-P | Field mustard | nucleus | 83.74 | 83.06 |
| CDY22675 | Canola | nucleus | 82.93 | 82.26 |
| CDX95048 | Canola | nucleus | 82.93 | 81.6 |
| CDY06320 | Canola | nucleus | 82.11 | 81.45 |
| GSMUA_Achr7P04750_001 | Banana | cytosol | 52.03 | 57.66 |
| VIT_16s0039g02160.t01 | Wine grape | nucleus | 53.66 | 51.16 |
| Os02t0604100-01 | Rice | nucleus | 52.85 | 50.39 |
| Solyc03g096960.2.1 | Tomato | nucleus | 52.85 | 50.39 |
| KRG93167 | Soybean | nucleus | 50.41 | 49.6 |
| KRH56501 | Soybean | nucleus | 50.41 | 49.6 |
| PGSC0003DMT400001524 | Potato | nucleus | 51.22 | 48.84 |
| KXG30583 | Sorghum | nucleus | 48.78 | 46.88 |
| TraesCS6B01G245400.1 | Wheat | nucleus | 48.78 | 46.51 |
| TraesCS6D01G198100.1 | Wheat | nucleus | 47.97 | 45.74 |
| TraesCS6A01G217300.1 | Wheat | nucleus | 47.97 | 45.74 |
| Zm00001d017141_P001 | Maize | nucleus | 47.15 | 44.96 |
Protein Annotations
| MapMan:35.2 | EntrezGene:837380 | UniProt:A0A178WA11 | ProteinID:AAF99782.1 | ProteinID:AEE28311.1 | ArrayExpress:AT1G08580 |
| EnsemblPlantsGene:AT1G08580 | RefSeq:AT1G08580 | TAIR:AT1G08580 | RefSeq:AT1G08580-TAIR-G | EnsemblPlants:AT1G08580.1 | TAIR:AT1G08580.1 |
| EMBL:BT010659 | EMBL:BT011497 | GO:GO:0008150 | RefSeq:NP_172334.1 | ProteinID:OAP13892.1 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR36709 |
| UniProt:Q9FRS7 | UniParc:UPI00000A8569 | SEG:seg | : | : | : |
Description
At1g08580 [Source:UniProtKB/TrEMBL;Acc:Q9FRS7]
Coordinates
chr1:-:2714994..2716532
Molecular Weight (calculated)
14054.2 Da
IEP (calculated)
11.150
GRAVY (calculated)
-1.296
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKYNEIAKK KREAKADRKR AIHGDPLTNK LKTRTPVPSV SGKRQRKLLR KWRREQKDMV EKGLVTMEDV EMASAQAASE DSKKSPRKFS VKKSLKLNKL
101: NNKGKKKKNQ KASGEKSADC MLE
101: NNKGKKKKNQ KASGEKSADC MLE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.