Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30583 | Sorghum | nucleus | 93.8 | 94.53 |
| Os02t0604100-01 | Rice | nucleus | 80.62 | 80.62 |
| TraesCS6D01G198100.1 | Wheat | nucleus | 78.29 | 78.29 |
| TraesCS6B01G245400.1 | Wheat | nucleus | 77.52 | 77.52 |
| TraesCS6A01G217300.1 | Wheat | nucleus | 77.52 | 77.52 |
| GSMUA_Achr7P04750_001 | Banana | cytosol | 44.96 | 52.25 |
| Bra018613.1-P | Field mustard | nucleus | 46.51 | 48.78 |
| Bra031633.1-P | Field mustard | nucleus | 45.74 | 47.58 |
| AT1G08580.1 | Thale cress | nucleus | 44.96 | 47.15 |
| CDX93551 | Canola | nucleus | 44.96 | 46.77 |
| CDY06320 | Canola | nucleus | 44.96 | 46.77 |
| CDY22675 | Canola | nucleus | 44.96 | 46.77 |
| CDX95048 | Canola | nucleus | 43.41 | 44.8 |
| VIT_16s0039g02160.t01 | Wine grape | nucleus | 44.19 | 44.19 |
| KRG93167 | Soybean | nucleus | 41.86 | 43.2 |
| Solyc03g096960.2.1 | Tomato | nucleus | 42.64 | 42.64 |
| PGSC0003DMT400001524 | Potato | nucleus | 42.64 | 42.64 |
| KRH56501 | Soybean | nucleus | 41.09 | 42.4 |
Protein Annotations
| EMBL:EU959438 | EMBL:EU970189 | EnsemblPlants:Zm00001d017141_P001 | EnsemblPlants:Zm00001d017141_T001 | EnsemblPlantsGene:Zm00001d017141 | EntrezGene:100275069 |
| ncoils:Coil | PANTHER:PTHR36709 | ProteinID:AQK72422.1 | SEG:seg | UniParc:UPI000182CF77 | UniProt:B6T373 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:186720984..186723755
Molecular Weight (calculated)
14531.9 Da
IEP (calculated)
11.372
GRAVY (calculated)
-1.241
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKYNVVQKN KRQCNQDRKR AAHGEPGTGK LKQRTAPVSM SGKRKKKLER RLNRKQKEAA MIKALENNMG DVDMVSVEES SEAAKGKSQV KFSVKKNSRI
101: QIKRLKGKGR KKAKNAKPPA KEKVDAMVE
101: QIKRLKGKGR KKAKNAKPPA KEKVDAMVE
001: MAKYNEIAKK KREAKADRKR AIHGDPLTNK LKTRTPVPSV SGKRQRKLLR KWRREQKDMV EKGLVTMEDV EMASAQAASE DSKKSPRKFS VKKSLKLNKL
101: NNKGKKKKNQ KASGEKSADC MLE
101: NNKGKKKKNQ KASGEKSADC MLE
Arabidopsis Description
At1g08580 [Source:UniProtKB/TrEMBL;Acc:Q9FRS7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.