Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g096960.2.1 | Tomato | nucleus | 61.26 | 52.71 |
| AT1G08580.1 | Thale cress | nucleus | 57.66 | 52.03 |
| CDX95048 | Canola | nucleus | 58.56 | 52.0 |
| KRG93167 | Soybean | nucleus | 58.56 | 52.0 |
| KRH56501 | Soybean | nucleus | 58.56 | 52.0 |
| VIT_16s0039g02160.t01 | Wine grape | nucleus | 60.36 | 51.94 |
| PGSC0003DMT400001524 | Potato | nucleus | 60.36 | 51.94 |
| Bra018613.1-P | Field mustard | nucleus | 55.86 | 50.41 |
| CDX93551 | Canola | nucleus | 55.86 | 50.0 |
| CDY22675 | Canola | nucleus | 55.86 | 50.0 |
| Os02t0604100-01 | Rice | nucleus | 57.66 | 49.61 |
| KXG30583 | Sorghum | nucleus | 56.76 | 49.22 |
| CDY06320 | Canola | nucleus | 54.95 | 49.19 |
| Bra031633.1-P | Field mustard | nucleus | 54.95 | 49.19 |
| Zm00001d017141_P001 | Maize | nucleus | 52.25 | 44.96 |
| TraesCS6A01G217300.1 | Wheat | nucleus | 49.55 | 42.64 |
| TraesCS6B01G245400.1 | Wheat | nucleus | 49.55 | 42.64 |
| TraesCS6D01G198100.1 | Wheat | nucleus | 49.55 | 42.64 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P04750_001 | EnsemblPlants:GSMUA_Achr7T04750_001 | EnsemblPlantsGene:GSMUA_Achr7G04750_001 | PANTHER:PTHR36709 | SEG:seg | UniParc:UPI00029622A6 |
| UniProt:M0TER5 | MapMan:35.2 | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G04750_001]
Coordinates
chr7:+:3576345..3580056
Molecular Weight (calculated)
12781.9 Da
IEP (calculated)
11.918
GRAVY (calculated)
-1.081
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKFNVIQKQ RRASVQDRKR AVHGDPNTRK LKLRTPPVSV SGKRKRKLFK KWRREQKEAM EKGLVTMEDV EMAVAEGSSE GTSMKPKVKF HLKKGSMLKL
101: KRSRGKGKSF N
101: KRSRGKGKSF N
001: MAKYNEIAKK KREAKADRKR AIHGDPLTNK LKTRTPVPSV SGKRQRKLLR KWRREQKDMV EKGLVTMEDV EMASAQAASE DSKKSPRKFS VKKSLKLNKL
101: NNKGKKKKNQ KASGEKSADC MLE
101: NNKGKKKKNQ KASGEKSADC MLE
Arabidopsis Description
At1g08580 [Source:UniProtKB/TrEMBL;Acc:Q9FRS7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.