Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017141_P001 | Maize | nucleus | 94.53 | 93.8 |
| Os02t0604100-01 | Rice | nucleus | 85.94 | 85.27 |
| TraesCS6D01G198100.1 | Wheat | nucleus | 78.12 | 77.52 |
| TraesCS6B01G245400.1 | Wheat | nucleus | 77.34 | 76.74 |
| TraesCS6A01G217300.1 | Wheat | nucleus | 77.34 | 76.74 |
| GSMUA_Achr7P04750_001 | Banana | cytosol | 49.22 | 56.76 |
| Bra018613.1-P | Field mustard | nucleus | 46.88 | 48.78 |
| AT1G08580.1 | Thale cress | nucleus | 46.88 | 48.78 |
| VIT_16s0039g02160.t01 | Wine grape | nucleus | 48.44 | 48.06 |
| Bra031633.1-P | Field mustard | nucleus | 46.09 | 47.58 |
| CDY22675 | Canola | nucleus | 45.31 | 46.77 |
| CDY06320 | Canola | nucleus | 45.31 | 46.77 |
| CDX93551 | Canola | nucleus | 45.31 | 46.77 |
| Solyc03g096960.2.1 | Tomato | nucleus | 46.88 | 46.51 |
| KRG93167 | Soybean | nucleus | 45.31 | 46.4 |
| PGSC0003DMT400001524 | Potato | nucleus | 46.09 | 45.74 |
| KRH56501 | Soybean | nucleus | 44.53 | 45.6 |
| CDX95048 | Canola | nucleus | 43.75 | 44.8 |
Protein Annotations
| EnsemblPlants:KXG30583 | EnsemblPlantsGene:SORBI_3004G207700 | ncoils:Coil | PANTHER:PTHR36709 | ProteinID:KXG30583 | ProteinID:KXG30583.1 |
| SEG:seg | UniParc:UPI0001FCCB3A | UniProt:A0A194YQS5 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr4:+:55792491..55795320
Molecular Weight (calculated)
14527.9 Da
IEP (calculated)
11.597
GRAVY (calculated)
-1.246
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKFNVVQKN RRQWKQDRKR AAHGEPGTGK LKQRTAPVSM SGKRKRKLER RLNREQKEAA MIKALENMGD VDMVSAEESS EAAKGKSQVK FSVKKNSRIQ
101: IKRLKGKGRK KAKNAKPPAK EKVDAMVE
101: IKRLKGKGRK KAKNAKPPAK EKVDAMVE
001: MAKYNEIAKK KREAKADRKR AIHGDPLTNK LKTRTPVPSV SGKRQRKLLR KWRREQKDMV EKGLVTMEDV EMASAQAASE DSKKSPRKFS VKKSLKLNKL
101: NNKGKKKKNQ KASGEKSADC MLE
101: NNKGKKKKNQ KASGEKSADC MLE
Arabidopsis Description
At1g08580 [Source:UniProtKB/TrEMBL;Acc:Q9FRS7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.