Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G245400.1 | Wheat | nucleus | 99.22 | 99.22 |
| TraesCS6D01G198100.1 | Wheat | nucleus | 98.45 | 98.45 |
| Os02t0604100-01 | Rice | nucleus | 79.07 | 79.07 |
| Zm00001d017141_P001 | Maize | nucleus | 77.52 | 77.52 |
| KXG30583 | Sorghum | nucleus | 76.74 | 77.34 |
| GSMUA_Achr7P04750_001 | Banana | cytosol | 42.64 | 49.55 |
| Bra018613.1-P | Field mustard | nucleus | 45.74 | 47.97 |
| AT1G08580.1 | Thale cress | nucleus | 45.74 | 47.97 |
| CDX93551 | Canola | nucleus | 45.74 | 47.58 |
| Bra031633.1-P | Field mustard | nucleus | 45.74 | 47.58 |
| CDY22675 | Canola | nucleus | 44.96 | 46.77 |
| CDY06320 | Canola | nucleus | 44.96 | 46.77 |
| Solyc03g096960.2.1 | Tomato | nucleus | 46.51 | 46.51 |
| PGSC0003DMT400001524 | Potato | nucleus | 45.74 | 45.74 |
| KRG93167 | Soybean | nucleus | 43.41 | 44.8 |
| VIT_16s0039g02160.t01 | Wine grape | nucleus | 44.19 | 44.19 |
| KRH56501 | Soybean | nucleus | 42.64 | 44.0 |
| CDX95048 | Canola | nucleus | 42.64 | 44.0 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G217300.1 | EnsemblPlantsGene:TraesCS6A01G217300 | PANTHER:PTHR36709 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6A:-:399879177..399881532
Molecular Weight (calculated)
14703.0 Da
IEP (calculated)
11.417
GRAVY (calculated)
-1.290
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKYNVVQKS KRESSHDRKR RAHGDPNSGK LKHHNAPIAI SGKRKRKLLR RLNRDQKEAV MVKALENNMG DVDMVSAETS SETAKDKSQM KFNVKKNSRI
101: QIKRLKGKGR KKAKNVKPPT KEKADAMVE
101: QIKRLKGKGR KKAKNVKPPT KEKADAMVE
001: MAKYNEIAKK KREAKADRKR AIHGDPLTNK LKTRTPVPSV SGKRQRKLLR KWRREQKDMV EKGLVTMEDV EMASAQAASE DSKKSPRKFS VKKSLKLNKL
101: NNKGKKKKNQ KASGEKSADC MLE
101: NNKGKKKKNQ KASGEKSADC MLE
Arabidopsis Description
At1g08580 [Source:UniProtKB/TrEMBL;Acc:Q9FRS7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.