Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93538 | Canola | cytosol | 85.27 | 85.27 |
| Bra018601.1-P | Field mustard | cytosol | 84.5 | 84.5 |
| CDX95034 | Canola | cytosol | 84.5 | 84.5 |
| PGSC0003DMT400050100 | Potato | cytosol | 77.52 | 78.12 |
| Solyc01g097300.2.1 | Tomato | cytosol | 76.74 | 77.34 |
| Os03t0628900-01 | Rice | cytosol | 72.87 | 74.6 |
| VIT_14s0081g00080.t01 | Wine grape | cytosol | 72.87 | 74.6 |
| EER91208 | Sorghum | cytosol | 71.32 | 73.02 |
| KRG92689 | Soybean | cytosol | 71.32 | 73.02 |
| KRH34096 | Soybean | cytosol | 71.32 | 73.02 |
| Zm00001d013708_P001 | Maize | cytosol | 69.77 | 71.43 |
| TraesCS5D01G388600.1 | Wheat | cytosol | 68.99 | 70.63 |
| GSMUA_Achr4P17760_001 | Banana | cytosol | 71.32 | 57.86 |
| HORVU5Hr1G093710.1 | Barley | cytosol, plastid, vacuole | 23.26 | 15.15 |
Protein Annotations
| Gene3D:1.10.287.370 | MapMan:20.3.2.4 | EntrezGene:837400 | UniProt:A0A178WP48 | ProteinID:AAF99774.1 | ProteinID:AEE28346.1 |
| Symbol:AIP3 | EMBL:AJ251088 | EMBL:AK227759 | ArrayExpress:AT1G08780 | EnsemblPlantsGene:AT1G08780 | RefSeq:AT1G08780 |
| TAIR:AT1G08780 | RefSeq:AT1G08780-TAIR-G | EnsemblPlants:AT1G08780.1 | TAIR:AT1G08780.1 | EMBL:BT004788 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016272 |
| GO:GO:0051082 | GO:GO:0051087 | InterPro:IPR009053 | RefSeq:NP_563827.1 | ProteinID:OAP19345.1 | PFAM:PF01920 |
| InterPro:PFDN4 | InterPro:PFD_beta-like | PIRSF:PIRSF016477 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR21100 | InterPro:Prefoldin |
| UniProt:Q9M4B5 | SUPFAM:SSF46579 | UniParc:UPI000000C48A | SEG:seg | : | : |
Description
AIP3Probable prefoldin subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M4B5]
Coordinates
chr1:-:2809778..2811313
Molecular Weight (calculated)
14881.4 Da
IEP (calculated)
4.242
GRAVY (calculated)
-0.798
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQQGSKSGS EMEVTWEDQQ NINIFSRLNN RVHDLDDDIK SAKEKCENLE DAGNELILAD EEMVRFQIGE VFAHVPRDDV ETKIEEMKEA TCKSLEKLEQ
101: EKESIVTQMA ALKKVLYAKF KDSINLEED
101: EKESIVTQMA ALKKVLYAKF KDSINLEED
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.