Factsheet for AT1G49590.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018814.1-P	Field mustard	nucleus	87.6	86.18
CDY28102	Canola	nucleus	87.19	86.12
CDY50960	Canola	nucleus	87.19	86.12
VIT_03s0063g00890.t01	Wine grape	nucleus	60.74	57.2
KRH76336	Soybean	nucleus	57.85	56.68
KRH33288	Soybean	nucleus	57.85	56.68
KRH71626	Soybean	nucleus	57.44	56.5
Os06t0215200-01	Rice	nucleus	55.79	55.56
EER89414	Sorghum	nucleus	55.37	54.92
Zm00001d044917_P001	Maize	nucleus	55.79	54.88
PGSC0003DMT400066376	Potato	nucleus	58.68	54.2
Solyc01g108430.2.1	Tomato	nucleus	58.68	54.2
TraesCS7D01G174600.1	Wheat	nucleus	54.55	54.1
TraesCS7A01G173200.1	Wheat	nucleus	54.13	53.69
TraesCS7B01G078500.1	Wheat	nucleus	54.13	53.69
GSMUA_Achr10P...	Banana	nucleus	42.56	53.65
HORVU7Hr1G035910.4	Barley	nucleus	54.13	49.62

Protein Annotations

MapMan:35.1	EntrezGene:841383	UniProt:A0A178W5A8	ProteinID:AAG13045.1	ProteinID:AEE32445.1	ArrayExpress:AT1G49590
EnsemblPlantsGene:AT1G49590	RefSeq:AT1G49590	TAIR:AT1G49590	RefSeq:AT1G49590-TAIR-G	EnsemblPlants:AT1G49590.1	TAIR:AT1G49590.1
EMBL:AY045687	EMBL:BT010196	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690
GO:GO:0003723	GO:GO:0003725	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0005681	GO:GO:0006139	GO:GO:0006259
GO:GO:0006397	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0008380
GO:GO:0009791	GO:GO:0009845	GO:GO:0009987	GO:GO:0015030	GO:GO:0031047	GO:GO:0046872
GO:GO:0080188	InterPro:IPR000690	InterPro:Matrin/U1-C_Znf_C2H2	InterPro:Matrin/U1-like-C_Znf_C2H2	RefSeq:NP_175382.1	ProteinID:OAP12543.1
PFAM:PF06220	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PFscan:PS50171	PANTHER:PTHR13173	PANTHER:PTHR13173:SF10	UniProt:Q7XA66
SMART:SM00451	InterPro:U1-CZ_Znf_C2H2	UniParc:UPI00001630C6	InterPro:ZOP1_OCRE	SEG:seg	:

Description

ZOP1Zinc finger protein ZOP1 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA66]

Coordinates

chr1:+:18354783..18356733

Molecular Weight (calculated)

27053.8 Da

IEP (calculated)

10.177

GRAVY (calculated)

-0.966

Length

242 amino acids

Sequence
(BLAST)

001: MTEYWVSQGN KWCEFCKIWI QNNPTSIRNH DLGKRHRECV DKKLTDMRER SAAKDKELKK NEKLLQQIEA KATRSYQKDI ATAQQVAKAN GAPEDGTSDW
101: MLDSASGYYY NQTNGLHYDS QSGFYYSDSI GHWVTQDEAY AAVKTSSGTK VPLVKKPVSS SGAGPSVGKP PGRLVTASLN PKRAVKGAAS SVDLGNNKRK
201: RQDEKPKKVS AEEKAALKAR EAARKRVEDR EKPLLGLYNR PF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.