Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72770 | Canola | nucleus | 73.85 | 73.47 |
| Bra016164.1-P | Field mustard | nucleus | 72.31 | 71.94 |
| CDX96296 | Canola | nucleus | 72.31 | 71.94 |
| CDY03705 | Canola | nucleus | 72.31 | 71.94 |
| Bra007957.1-P | Field mustard | nucleus | 69.74 | 71.2 |
| HORVU3Hr1G004310.1 | Barley | nucleus | 27.18 | 28.8 |
| TraesCS3D01G033100.1 | Wheat | mitochondrion, nucleus | 26.15 | 28.02 |
| KXG31995 | Sorghum | nucleus | 23.08 | 27.11 |
| Os01t0127450-00 | Rice | nucleus | 26.15 | 26.84 |
| TraesCS3A01G046800.1 | Wheat | nucleus | 26.67 | 26.4 |
| TraesCS3B01G036000.1 | Wheat | nucleus | 26.15 | 26.15 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:843443 | ProteinID:AAG51688.1 | ProteinID:AEE35154.1 | EMBL:AF370609 |
| ArrayExpress:AT1G71030 | EnsemblPlantsGene:AT1G71030 | RefSeq:AT1G71030 | TAIR:AT1G71030 | RefSeq:AT1G71030-TAIR-G | EnsemblPlants:AT1G71030.1 |
| TAIR:AT1G71030.1 | Symbol:ATMYBL2 | EMBL:AY048231 | EMBL:AY087093 | EMBL:AY091697 | EMBL:AY519519 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009718 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009737 |
| GO:GO:0009739 | GO:GO:0009751 | GO:GO:0009753 | GO:GO:0009987 | GO:GO:0010023 | GO:GO:0019748 |
| GO:GO:0046686 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | RefSeq:NP_177259.1 | PFAM:PF00249 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001185 | PO:PO:0001380 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF507 | UniProt:Q9C9A5 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000A95F5 |
| SEG:seg | : | : | : | : | : |
Description
ATMYBL2At1g71030/F23N20_2 [Source:UniProtKB/TrEMBL;Acc:Q9C9A5]
Coordinates
chr1:-:26795052..26796529
Molecular Weight (calculated)
22099.4 Da
IEP (calculated)
10.411
GRAVY (calculated)
-0.701
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKTRLRALS PPSGMQHRKR CRLRGRNYVR PEVKQRNFSK DEDDLILKLH ALLGNRWSLI AGRLPGRTDN EVRIHWETYL KRKLVKMGID PTNHRLHHHT
101: NYISRRHLHS SHKEHETKII SDQSSSVSES CGVTILPIPS TNCSEDSTST GRSHLPDLNI GLIPAVTSLP ALCLQDSSES STNGSTGQET LLLFR
101: NYISRRHLHS SHKEHETKII SDQSSSVSES CGVTILPIPS TNCSEDSTST GRSHLPDLNI GLIPAVTSLP ALCLQDSSES STNGSTGQET LLLFR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.