Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83366 | Canola | nucleus | 85.11 | 93.02 |
| Bra004539.1-P | Field mustard | nucleus | 84.04 | 92.94 |
| CDX80016 | Canola | nucleus | 84.04 | 91.86 |
| CDX95700 | Canola | nucleus | 84.04 | 91.86 |
| CDY42045 | Canola | nucleus | 84.04 | 91.86 |
| AT4G01060.1 | Thale cress | nucleus | 52.13 | 63.64 |
| AT1G01380.1 | Thale cress | cytosol, nucleus, plastid | 47.87 | 54.22 |
| AT2G30432.1 | Thale cress | nucleus | 43.62 | 48.81 |
| AT5G53200.1 | Thale cress | nucleus | 53.19 | 47.17 |
| AT2G30420.1 | Thale cress | nucleus | 50.0 | 41.96 |
| AT2G30424.1 | Thale cress | nucleus | 41.49 | 39.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | EntrezGene:819249 | ProteinID:AAD23043.1 | EMBL:AB004871 | ProteinID:AEC10691.1 |
| ArrayExpress:AT2G46410 | EnsemblPlantsGene:AT2G46410 | RefSeq:AT2G46410 | TAIR:AT2G46410 | RefSeq:AT2G46410-TAIR-G | EnsemblPlants:AT2G46410.1 |
| TAIR:AT2G46410.1 | EMBL:AY074637 | EMBL:AY519521 | Symbol:CPC | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0006357 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009753 | GO:GO:0009791 | GO:GO:0009913 |
| GO:GO:0009987 | GO:GO:0010063 | GO:GO:0010376 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| InterPro:Homeobox-like_sf | RefSeq:NP_182164.1 | UniProt:O22059 | PFAM:PF00249 | PO:PO:0000013 | PO:PO:0000026 |
| PO:PO:0000037 | PO:PO:0000258 | PO:PO:0000263 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0003015 | PO:PO:0004507 | PO:PO:0005417 | PO:PO:0006203 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009046 | PO:PO:0020100 | PO:PO:0020124 | PO:PO:0025022 | PO:PO:0025257 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF631 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000AD033 | SEG:seg |
Description
CPCTranscription factor CPC [Source:UniProtKB/Swiss-Prot;Acc:O22059]
Coordinates
chr2:-:19049021..19050369
Molecular Weight (calculated)
11385.7 Da
IEP (calculated)
10.211
GRAVY (calculated)
-1.019
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MFRSDKAEKM DKRRRRQSKA KASCSEEVSS IEWEAVKMSE EEEDLISRMY KLVGDRWELI AGRIPGRTPE EIERYWLMKH GVVFANRRRD FFRK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.