Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84835 | Canola | nucleus | 55.36 | 72.94 |
| CDY24000 | Canola | nucleus | 54.46 | 71.76 |
| AT2G30432.1 | Thale cress | nucleus | 53.57 | 71.43 |
| Bra026297.1-P | Field mustard | cytosol, nucleus, peroxisome | 33.04 | 68.52 |
| AT2G30424.1 | Thale cress | nucleus | 57.14 | 64.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.32 | 62.35 |
| GSMUA_Achr8P19880_001 | Banana | nucleus | 47.32 | 61.63 |
| PGSC0003DMT400000600 | Potato | nucleus | 33.93 | 61.29 |
| VIT_15s0046g01130.t01 | Wine grape | nucleus | 47.32 | 60.23 |
| AT5G53200.1 | Thale cress | nucleus | 56.25 | 59.43 |
| KRH27851 | Soybean | cytosol | 41.07 | 57.5 |
| KRH77639 | Soybean | cytosol | 41.07 | 57.5 |
| VIT_16s0050g02530.t01 | Wine grape | nucleus | 43.75 | 55.68 |
| AT4G01060.1 | Thale cress | nucleus | 37.5 | 54.55 |
| Solyc01g095640.1.1 | Tomato | nucleus | 44.64 | 53.19 |
| AT1G01380.1 | Thale cress | cytosol, nucleus, plastid | 37.5 | 50.6 |
| AT2G46410.1 | Thale cress | nucleus | 41.96 | 50.0 |
| HORVU3Hr1G055260.2 | Barley | nucleus | 30.36 | 44.74 |
| EES03290 | Sorghum | nucleus | 28.57 | 41.03 |
| Zm00001d044194_P001 | Maize | nucleus | 27.68 | 39.74 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | EntrezGene:817593 | ProteinID:AAB63092.1 | ProteinID:AAM14822.1 | ProteinID:ADC68265.1 |
| ProteinID:ADC68266.1 | ProteinID:ADC68269.1 | ProteinID:ADC68270.1 | ProteinID:ADC68276.1 | ProteinID:ADC68278.1 | ProteinID:ADC68279.1 |
| ProteinID:ADC68281.1 | ProteinID:ADC68282.1 | ProteinID:ADC68283.1 | ProteinID:AEC08385.1 | ArrayExpress:AT2G30420 | EnsemblPlantsGene:AT2G30420 |
| RefSeq:AT2G30420 | TAIR:AT2G30420 | RefSeq:AT2G30420-TAIR-G | EnsemblPlants:AT2G30420.1 | TAIR:AT2G30420.1 | EMBL:AY234411 |
| EMBL:AY519520 | EMBL:AY649255 | Unigene:At.38362 | Symbol:ETC2 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0006357 | GO:GO:0007154 | GO:GO:0007267 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | GO:GO:0048629 | GO:GO:0080147 | GO:GO:1900033 | InterPro:Homeobox-like_sf | RefSeq:NP_850145.1 |
| PFAM:PF00249 | PO:PO:0000293 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF631 | UniProt:Q84RD1 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00001623A0 | : | : | : |
Description
ETC2MYB-like transcription factor ETC2 [Source:UniProtKB/Swiss-Prot;Acc:Q84RD1]
Coordinates
chr2:-:12960847..12962162
Molecular Weight (calculated)
13606.2 Da
IEP (calculated)
10.649
GRAVY (calculated)
-0.950
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNTNRLRLR RGPSLRQTKF TRSRYDSEEV SSIEWEFISM TEQEEDLISR MYRLVGNRWD LIAGRVVGRK ANEIERYWIM RNSDYFSHKR RRLNNSPFFS
101: TSPLNLQENL KL
101: TSPLNLQENL KL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.