Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036539.1-P | Field mustard | plastid | 80.29 | 85.2 |
| CDY19809 | Canola | plastid | 80.29 | 85.2 |
| CDX87092 | Canola | plastid | 83.65 | 84.06 |
| Solyc11g008980.1.1 | Tomato | plastid | 54.33 | 55.39 |
| KRH00947 | Soybean | plastid | 52.88 | 54.73 |
| PGSC0003DMT400041830 | Potato | mitochondrion, plastid | 52.88 | 54.46 |
| VIT_04s0023g00790.t01 | Wine grape | mitochondrion | 56.73 | 54.13 |
| GSMUA_Achr6P28740_001 | Banana | mitochondrion | 47.6 | 47.6 |
| AT5G55710.1 | Thale cress | plastid | 36.54 | 36.36 |
Protein Annotations
| MapMan:35.1 | EntrezGene:819396 | UniProt:A0A178VYR0 | ProteinID:AAC63638.1 | ProteinID:AEC10895.1 | ArrayExpress:AT2G47840 |
| EnsemblPlantsGene:AT2G47840 | RefSeq:AT2G47840 | TAIR:AT2G47840 | RefSeq:AT2G47840-TAIR-G | EnsemblPlants:AT2G47840.1 | TAIR:AT2G47840.1 |
| EMBL:AY050346 | EMBL:AY094045 | Unigene:At.12945 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009528 |
| GO:GO:0009536 | GO:GO:0009706 | GO:GO:0009941 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 |
| RefSeq:NP_566112.1 | UniProt:O82251 | ProteinID:OAP10213.1 | PFAM:PF16166 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR33510 | PANTHER:PTHR33510:SF1 | TMHMM:TMhelix | InterPro:Tic20 | UniParc:UPI00000A1EF1 | : |
Description
TIC20-IITic20-II [Source:UniProtKB/TrEMBL;Acc:A0A178VYR0]
Coordinates
chr2:-:19594187..19595001
Molecular Weight (calculated)
22913.2 Da
IEP (calculated)
10.512
GRAVY (calculated)
0.462
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLCLSLHQ TLTNPLSAPR CRPLSLSFPG SSTFSIRPSS RRATALTTRA SYTPTPATER VISIASYALP FFNSLQYGRF LFAQYPRLGL LFEPIFPILN
101: LYRSVPYASF VAFFGLYLGV VRNTSFSRYV RFNAMQAVTL DVLLAVPVLL TRILDPGQGG GFGMKAMMWG HTGVFVFSFM CFVYGVVSSL LGKTPYIPFV
201: ADAAGRQL
101: LYRSVPYASF VAFFGLYLGV VRNTSFSRYV RFNAMQAVTL DVLLAVPVLL TRILDPGQGG GFGMKAMMWG HTGVFVFSFM CFVYGVVSSL LGKTPYIPFV
201: ADAAGRQL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.