Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028788.1-P | Field mustard | nucleus | 76.38 | 75.19 |
| CDY04913 | Canola | nucleus | 76.38 | 75.19 |
| Bra009451.1-P | Field mustard | nucleus | 77.17 | 73.68 |
| CDX70222 | Canola | nucleus | 77.17 | 73.68 |
| CDY44858 | Canola | nucleus | 77.17 | 73.68 |
| CDY14155 | Canola | nucleus | 74.02 | 72.87 |
| CDY58442 | Canola | nucleus | 75.59 | 72.18 |
| CDY11293 | Canola | nucleus | 74.8 | 71.43 |
| AT3G10525.1 | Thale cress | cytosol | 57.48 | 57.03 |
| Bra005808.1-P | Field mustard | nucleus | 64.57 | 52.9 |
Protein Annotations
| MapMan:13.1.1.3.2 | EntrezGene:830326 | ProteinID:AED90749.1 | EMBL:AK175850 | ArrayExpress:AT5G04470 | EnsemblPlantsGene:AT5G04470 |
| RefSeq:AT5G04470 | TAIR:AT5G04470 | RefSeq:AT5G04470-TAIR-G | EnsemblPlants:AT5G04470.1 | TAIR:AT5G04470.1 | EMBL:AY085204 |
| Unigene:At.25536 | EMBL:BT009698 | ProteinID:CAB85553.1 | GO:GO:0003674 | GO:GO:0004860 | GO:GO:0004861 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010026 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0030154 |
| GO:GO:0030234 | GO:GO:0042023 | GO:GO:0045736 | GO:GO:0045786 | GO:GO:0045839 | RefSeq:NP_196067.1 |
| PO:PO:0000013 | PO:PO:0000017 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000282 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009015 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0020148 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF13 |
| UniProt:Q9LZ78 | Symbol:SIM | UniParc:UPI00000A7094 | SEG:seg | : | : |
Description
SIMCyclin-dependent protein kinase inhibitor SIM [Source:UniProtKB/Swiss-Prot;Acc:Q9LZ78]
Coordinates
chr5:-:1266625..1267416
Molecular Weight (calculated)
14091.9 Da
IEP (calculated)
10.648
GRAVY (calculated)
-0.679
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLDLIQDLP ILNFPPAIKI RANTNRDDDG GGCTTPTSSD HKIPPTTATT PPPPPQKPRP PSTPSSLGIR SCKRKLMTSL SKYEIIVNKD EIERFFSSVY
101: NQTMASSTTT AITVAKRRRS FRSCSRR
101: NQTMASSTTT AITVAKRRRS FRSCSRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.