Factsheet for AT5G18290.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

endoplasmic reticulum 6
golgi 5
extracellular 5
vacuole 5
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	84.36	84.36
CDY38504	Canola	endoplasmic reticulum, extracellular, vacuole	84.36	84.36
CDY66671	Canola	endoplasmic reticulum, extracellular, vacuole	84.36	84.36
AT3G04090.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	71.19	72.08
KRG94774	Soybean	plasma membrane	57.61	56.45
KRH06755	Soybean	plasma membrane	56.38	55.24
KRH08462	Soybean	extracellular, plasma membrane, vacuole	53.09	52.65
KRH70120	Soybean	extracellular, plasma membrane, vacuole	53.5	52.63
TraesCS4A01G180200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	49.38	49.59
TraesCS4B01G137500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	49.38	49.18
TraesCS4D01G132200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	49.38	49.18
EES19498	Sorghum	plasma membrane	48.56	48.56
GSMUA_Achr11P...	Banana	plasma membrane	46.91	47.9
Os01t0182200-02	Rice	endoplasmic reticulum, plasma membrane	47.74	47.15
Zm00001d010325_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	46.91	46.91
Zm00001d048959_P002	Maize	endoplasmic reticulum, extracellular, vacuole	42.39	43.83
EES08298	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	44.03	43.5
Zm00001d044543_P001	Maize	plastid	27.16	26.09
Zm00001d032015_P001	Maize	plastid	26.34	25.6
AT3G56950.2	Thale cress	plasma membrane	26.75	25.0
Zm00001d017903_P001	Maize	cytosol	28.81	16.55

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.4	EntrezGene:831947	ProteinID:AED92534.1	ProteinID:AED92535.1	EMBL:AK117849
ArrayExpress:AT5G18290	EnsemblPlantsGene:AT5G18290	RefSeq:AT5G18290	TAIR:AT5G18290	RefSeq:AT5G18290-TAIR-G	EnsemblPlants:AT5G18290.1
TAIR:AT5G18290.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	Unigene:At.31448	ProteinID:BAB09487.1	EMBL:BT005263
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005789	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	RefSeq:NP_001190329.1	RefSeq:NP_197330.1	PFAM:PF00230
PO:PO:0000293	PO:PO:0001185	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0009001
PO:PO:0009005	PO:PO:0009009	PO:PO:0009015	PO:PO:0009025	PO:PO:0009029	PO:PO:0009032
PO:PO:0009046	PO:PO:0009052	PRINTS:PR00783	PANTHER:PTHR19139	PANTHER:PTHR19139:SF75	UniProt:Q9FK43
Symbol:SIP1;2	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI000000C5B4	SEG:seg	:

Description

SIP1-2Probable aquaporin SIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK43]

Coordinates

chr5:-:6055028..6056700

Molecular Weight (calculated)

26037.3 Da

IEP (calculated)

10.598

GRAVY (calculated)

0.778

Length

243 amino acids

Sequence
(BLAST)

001: MSAVKSALGD MVITFLWVIL SATFGIQTAA IVSAVGFHGI TWAPLVISTL VVFVSISIFT VIGNVLGGAS FNPCGNAAFY TAGVSSDSLF SLAIRSPAQA
101: IGAAGGAITI MEMIPEKYKT RIGGKPSLQF GAHNGAISEV VLSFSVTFLV LLIILRGPRK LLAKTFLLAL ATVSVFVVGS KFTRPFMNPA IAFGWAYIYK
201: SHNTWDHFYV YWISSYTGAI LSAMLFRIIF PAPPLVQKKQ KKA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.