Factsheet for TraesCS4A01G180200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G137500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	99.17	98.36
TraesCS4D01G132200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	98.35	97.54
EES19498	Sorghum	plasma membrane	84.3	83.95
Os01t0182200-02	Rice	endoplasmic reticulum, plasma membrane	84.71	83.33
Zm00001d010325_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	83.47	83.13
EES08298	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	76.86	75.61
Zm00001d048959_P002	Maize	endoplasmic reticulum, extracellular, vacuole	73.14	75.32
GSMUA_Achr11P...	Banana	plasma membrane	66.12	67.23
VIT_08s0007g07680.t01	Wine grape	extracellular, plasma membrane, vacuole	62.4	63.45
KRH06755	Soybean	plasma membrane	63.64	62.1
KRG94774	Soybean	plasma membrane	63.22	61.69
Solyc10g078490.1.1	Tomato	nucleus	60.33	60.08
PGSC0003DMT400021557	Potato	endoplasmic reticulum, plasma membrane, vacuole	59.5	59.26
PGSC0003DMT400048461	Potato	extracellular	57.44	58.16
KRH08462	Soybean	extracellular, plasma membrane, vacuole	57.85	57.14
KRH70120	Soybean	extracellular, plasma membrane, vacuole	57.44	56.28
Solyc12g019690.1.1	Tomato	extracellular, plasma membrane, vacuole	55.37	55.37
AT3G04090.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	52.89	53.33
CDY50883	Canola	extracellular, plasma membrane	52.07	52.72
Bra031946.1-P	Field mustard	extracellular, plasma membrane	52.07	52.72
CDY42904	Canola	plasma membrane	51.65	52.3
Bra040150.1-P	Field mustard	endoplasmic reticulum, plasma membrane	54.13	51.57
KRH56152	Soybean	extracellular	50.41	51.05
KRH25362	Soybean	endoplasmic reticulum, extracellular, plasma membrane	49.59	50.21
CDY66671	Canola	endoplasmic reticulum, extracellular, vacuole	50.41	50.21
CDY38504	Canola	endoplasmic reticulum, extracellular, vacuole	50.41	50.21
Bra002151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	50.41	50.21
AT5G18290.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	49.59	49.38
Zm00001d032015_P001	Maize	plastid	45.87	44.4
Zm00001d044543_P001	Maize	plastid	45.45	43.48
Solyc10g078500.1.1	Tomato	extracellular	18.18	42.31
TraesCS4A01G126900.1	Wheat	plasma membrane	31.41	30.04
Zm00001d017903_P001	Maize	cytosol	47.11	26.95

Protein Annotations

EnsemblPlants:TraesCS4A01G180200.1	EnsemblPlantsGene:TraesCS4A01G180200	Gene3D:1.20.1080.10	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085	InterPro:Aquaporin-like
InterPro:Aquaporin_transptr	InterPro:IPR023271	InterPro:MIP	PANTHER:PTHR19139	PANTHER:PTHR19139:SF75	PFAM:PF00230
PRINTS:PR00783	SEG:seg	SUPFAM:SSF81338	TMHMM:TMhelix	MapMan:24.3.1.4	:

Description

No Description!

Coordinates

chr4A:+:454590268..454592086

Molecular Weight (calculated)

25283.1 Da

IEP (calculated)

8.604

GRAVY (calculated)

0.727

Length

242 amino acids

Sequence
(BLAST)

001: MGAAVREAAA DGVVTFLWVL CVSTLGASTA AVTTYLSLHE GIHYALLVTV SILALLLFAF NLLCDALGGA SFNPTGVAAF YAAGLTSPSL FSIALRLPAQ
101: AAGAVGGALA ISELMPEQYK HMLGGPSLKV DPHTGAVAEG VLTFVITFAV LCIIVKGPRN PIVKTAMLSV TTVSLVLTGA AYTGPSMNPA NAFGWAYVNN
201: LHNTWEQLYV YWICPFIGAI LAAWTFRAVF PPPAPKPKTK KA

Best Arabidopsis Sequence Match ( AT3G04090.1 )
(BLAST)

001: MMGVLKSAIG DMLMTFSWVV LSATFGIQTA AIISAGDFQA ITWAPLVILT SLIFVYVSIF TVIFGSASFN PTGSAAFYVA GVPGDTLFSL AIRLPAQAIG
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA

Arabidopsis Description

SIP1-1SIP1A [Source:UniProtKB/TrEMBL;Acc:A0A178V5Y6]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.