Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50883 | Canola | extracellular, plasma membrane | 98.74 | 98.74 |
| AT3G04090.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 89.12 | 88.75 |
| CDY38504 | Canola | endoplasmic reticulum, extracellular, vacuole | 68.2 | 67.08 |
| CDY66671 | Canola | endoplasmic reticulum, extracellular, vacuole | 67.78 | 66.67 |
| KRG94774 | Soybean | plasma membrane | 59.83 | 57.66 |
| KRH06755 | Soybean | plasma membrane | 59.0 | 56.85 |
| KRH08462 | Soybean | extracellular, plasma membrane, vacuole | 56.07 | 54.69 |
| GSMUA_Achr11P... | Banana | plasma membrane | 53.56 | 53.78 |
| KRH70120 | Soybean | extracellular, plasma membrane, vacuole | 55.23 | 53.44 |
| EES19498 | Sorghum | plasma membrane | 53.14 | 52.26 |
| Zm00001d010325_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 52.72 | 51.85 |
| TraesCS4A01G180200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 52.3 | 51.65 |
| TraesCS4D01G132200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 52.72 | 51.64 |
| TraesCS4B01G137500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 52.3 | 51.23 |
| Os01t0182200-02 | Rice | endoplasmic reticulum, plasma membrane | 52.72 | 51.22 |
| Zm00001d048959_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 46.44 | 47.23 |
| EES08298 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 48.12 | 46.75 |
| CDX72093 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 11.3 | 29.67 |
| CDX76020 | Canola | extracellular, mitochondrion | 11.72 | 28.57 |
| Zm00001d032015_P001 | Maize | plastid | 29.71 | 28.4 |
| Zm00001d044543_P001 | Maize | plastid | 29.71 | 28.06 |
| CDY47387 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 25.94 | 26.16 |
| CDY08683 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 25.94 | 26.16 |
| CDY51268 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 25.94 | 26.05 |
| CDX67665 | Canola | plasma membrane | 25.52 | 25.63 |
| CDY27177 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 23.85 | 24.36 |
| Zm00001d017903_P001 | Maize | cytosol | 33.47 | 18.91 |
| CDX72092 | Canola | extracellular | 7.11 | 17.0 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.4 | GO:A0A078I000 | UniProt:A0A078I000 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EnsemblPlants:CDY42904 | ProteinID:CDY42904 | ProteinID:CDY42904.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00075635001 | InterPro:IPR023271 | InterPro:MIP | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF75 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0004EC4345 | SEG:seg | : |
Description
BnaC05g47470DBnaC05g47470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I000]
Coordinates
chrLK032538:-:76812..79429
Molecular Weight (calculated)
25603.5 Da
IEP (calculated)
10.019
GRAVY (calculated)
0.681
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVVKSAIGD MLMTFSWVVL SATFGLQTTE IISAAGFQGI AWAPLAITTF LIFVYVSIFT VVFGSASFNP TGNAAFYAAG VPGDTLFTLA IRLPAQAAGA
101: AGGALAIMEF IPEKYKHMIS GPSLQVDVHT GAIAETILSF GITFAALLII IRGPRRLLAK TFLLALATIC FVVAGSKYTG PAMNPAIAFG WAYMYSSHNT
201: WDHFYVYWIS SFVGALSAAL VFRTIFPPHK PQQKKQKKA
101: AGGALAIMEF IPEKYKHMIS GPSLQVDVHT GAIAETILSF GITFAALLII IRGPRRLLAK TFLLALATIC FVVAGSKYTG PAMNPAIAFG WAYMYSSHNT
201: WDHFYVYWIS SFVGALSAAL VFRTIFPPHK PQQKKQKKA
001: MMGVLKSAIG DMLMTFSWVV LSATFGIQTA AIISAGDFQA ITWAPLVILT SLIFVYVSIF TVIFGSASFN PTGSAAFYVA GVPGDTLFSL AIRLPAQAIG
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA
Arabidopsis Description
SIP1-1SIP1A [Source:UniProtKB/TrEMBL;Acc:A0A178V5Y6]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.