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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031946.1-P Field mustard extracellular, plasma membrane 99.58 99.58
CDY42904 Canola plasma membrane 98.74 98.74
AT3G04090.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 89.12 88.75
CDY38504 Canola endoplasmic reticulum, extracellular, vacuole 69.04 67.9
CDY66671 Canola endoplasmic reticulum, extracellular, vacuole 68.62 67.49
KRG94774 Soybean plasma membrane 59.83 57.66
KRH06755 Soybean plasma membrane 59.0 56.85
KRH08462 Soybean extracellular, plasma membrane, vacuole 56.07 54.69
GSMUA_Achr11P... Banana plasma membrane 53.56 53.78
KRH70120 Soybean extracellular, plasma membrane, vacuole 55.23 53.44
EES19498 Sorghum plasma membrane 53.14 52.26
TraesCS4A01G180200.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 52.72 52.07
TraesCS4D01G132200.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 53.14 52.05
Zm00001d010325_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 52.72 51.85
TraesCS4B01G137500.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 52.72 51.64
Os01t0182200-02 Rice endoplasmic reticulum, plasma membrane 52.72 51.22
Zm00001d048959_P002 Maize endoplasmic reticulum, extracellular, vacuole 46.44 47.23
EES08298 Sorghum endoplasmic reticulum, extracellular, plasma membrane 48.12 46.75
CDX72093 Canola endoplasmic reticulum, plasma membrane, vacuole 11.72 30.77
CDX76020 Canola extracellular, mitochondrion 12.13 29.59
Zm00001d032015_P001 Maize plastid 29.29 28.0
Zm00001d044543_P001 Maize plastid 29.29 27.67
CDY08683 Canola endoplasmic reticulum, extracellular, plasma membrane 26.36 26.58
CDY47387 Canola endoplasmic reticulum, extracellular, plasma membrane 26.36 26.58
CDY51268 Canola endoplasmic reticulum, extracellular, plasma membrane 26.36 26.47
CDX67665 Canola plasma membrane 25.94 26.05
CDY27177 Canola endoplasmic reticulum, extracellular, plasma membrane 24.27 24.79
Zm00001d017903_P001 Maize cytosol 32.64 18.44
CDX72092 Canola extracellular 7.11 17.0
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.4GO:A0A078IP78UniProt:A0A078IP78InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
EnsemblPlants:CDY50883ProteinID:CDY50883ProteinID:CDY50883.1ncoils:CoilGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00097713001InterPro:IPR023271InterPro:MIPPFAM:PF00230PRINTS:PR00783
PANTHER:PTHR19139PANTHER:PTHR19139:SF75SUPFAM:SSF81338TMHMM:TMhelixUniParc:UPI0004EE5979SEG:seg
Description
BnaA05g37440DBnaA05g37440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IP78]
Coordinates
chrLK032945:-:92910..95706
Molecular Weight (calculated)
25584.5 Da
IEP (calculated)
9.896
GRAVY (calculated)
0.695
Length
239 amino acids
Sequence
(BLAST)
001: MGVVKSAIGD MLMTFSWVVL SATFGLQTTE IISAAGFQGI AWAPLAITTF LIFFYVSIFT VVFGSASFNP TGNAAFYAAG VPGDTLFTLA IRLPAQAAGA
101: AGGALAIMEF IPEKYKHMIS GPSLQVDVHT GAIAETILSF GITFAALLII IRGPRRLLAK TFLLALATIC FVVAGSKYTG PAMNPAIAFG WAYMYSSHNT
201: WDHFYVYWIS SFVGALSAAL VFRTIFPPPT PQQKKQKKA
Best Arabidopsis Sequence Match ( AT3G04090.1 )
(BLAST)
001: MMGVLKSAIG DMLMTFSWVV LSATFGIQTA AIISAGDFQA ITWAPLVILT SLIFVYVSIF TVIFGSASFN PTGSAAFYVA GVPGDTLFSL AIRLPAQAIG
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA
Arabidopsis Description
SIP1-1SIP1A [Source:UniProtKB/TrEMBL;Acc:A0A178V5Y6]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.