Factsheet for Bra031946.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 7
endoplasmic reticulum 5
vacuole 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50883	Canola	extracellular, plasma membrane	99.58	99.58
AT3G04090.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	88.7	88.33
Bra040150.1-P	Field mustard	endoplasmic reticulum, plasma membrane	92.89	87.4
Bra002151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	68.2	67.08
KRG94774	Soybean	plasma membrane	59.83	57.66
KRH06755	Soybean	plasma membrane	59.0	56.85
KRH08462	Soybean	extracellular, plasma membrane, vacuole	56.07	54.69
GSMUA_Achr11P...	Banana	plasma membrane	53.56	53.78
KRH70120	Soybean	extracellular, plasma membrane, vacuole	55.23	53.44
EES19498	Sorghum	plasma membrane	53.14	52.26
TraesCS4A01G180200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	52.72	52.07
TraesCS4D01G132200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	53.14	52.05
Zm00001d010325_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	52.72	51.85
TraesCS4B01G137500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	52.72	51.64
Os01t0182200-02	Rice	endoplasmic reticulum, plasma membrane	52.72	51.22
Zm00001d048959_P002	Maize	endoplasmic reticulum, extracellular, vacuole	46.44	47.23
EES08298	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	48.12	46.75
Zm00001d032015_P001	Maize	plastid	29.29	28.0
Zm00001d044543_P001	Maize	plastid	29.29	27.67
Bra014661.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	26.36	26.58
Bra007285.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	25.52	26.07
Bra003257.1-P	Field mustard	plasma membrane	25.94	26.05
Zm00001d017903_P001	Maize	cytosol	32.22	18.2

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.4	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra031946	EnsemblPlants:Bra031946.1
EnsemblPlants:Bra031946.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4ET16
InterPro:MIP	PFAM:PF00230	PRINTS:PR00783	PANTHER:PTHR19139	PANTHER:PTHR19139:SF75	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI000254652B	SEG:seg	:	:	:

Description

AT3G04090 (E=2e-088) SIP1;1, SIP1A | SIP1A (SMALL AND BASIC INTRINSIC PROTEIN 1A); water channel

Coordinates

chrA02:-:26969564..26971176

Molecular Weight (calculated)

25611.5 Da

IEP (calculated)

9.896

GRAVY (calculated)

0.684

Length

239 amino acids

Sequence
(BLAST)

001: MGVVKSAIGD MLMTFSWVVL SATFGLQTTE IISAAGFQGI AWAPLAITTF LIFFYVSIFT VVFGSASFNP TGNAAFYAAG VPGDTLFTLA IRLPAQAAGA
101: AGGALAIMEF IPEKYKHMIS GPSLQVDVHT GAIAETILSF GITFAALLII IRGPRRLLAK TFLLALATIC FVVAGSKYTG PAMNPAIAFG WAYMYSSHNT
201: WDHFYVYWIN SFVGALSAAL VFRTIFPPPT PQQKKQKKA

Best Arabidopsis Sequence Match ( AT3G04090.1 )
(BLAST)

001: MMGVLKSAIG DMLMTFSWVV LSATFGIQTA AIISAGDFQA ITWAPLVILT SLIFVYVSIF TVIFGSASFN PTGSAAFYVA GVPGDTLFSL AIRLPAQAIG
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA

Arabidopsis Description

SIP1-1SIP1A [Source:UniProtKB/TrEMBL;Acc:A0A178V5Y6]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.