Factsheet for Bra014661.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08683	Canola	endoplasmic reticulum, extracellular, plasma membrane	97.05	97.05
CDY47387	Canola	endoplasmic reticulum, extracellular, plasma membrane	97.05	97.05
CDX76020	Canola	extracellular, mitochondrion	39.66	95.92
Bra003257.1-P	Field mustard	plasma membrane	89.87	89.5
Bra007285.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	80.59	81.62
AT3G56950.2	Thale cress	plasma membrane	87.76	80.0
VIT_08s0040g00400.t01	Wine grape	endoplasmic reticulum	62.87	61.83
KRH66640	Soybean	extracellular	58.23	60.0
KRG95000	Soybean	extracellular	59.49	59.75
Solyc01g056720.2.1	Tomato	endoplasmic reticulum, extracellular	53.59	58.8
GSMUA_Achr5P27600_001	Banana	extracellular	53.59	53.36
Zm00001d028951_P001	Maize	plasma membrane	50.21	47.79
Os03t0320000-01	Rice	endoplasmic reticulum, plasma membrane	48.95	46.4
EER92349	Sorghum	endoplasmic reticulum, plasma membrane	48.52	46.18
TraesCS4D01G179600.1	Wheat	plasma membrane	47.68	45.38
TraesCS4A01G126900.1	Wheat	plasma membrane	48.1	45.06
GSMUA_Achr5P21450_001	Banana	plasma membrane	43.04	39.08
TraesCS4B01G178000.2	Wheat	plasma membrane	47.68	37.92
Bra031946.1-P	Field mustard	extracellular, plasma membrane	26.58	26.36
Bra040150.1-P	Field mustard	endoplasmic reticulum, plasma membrane	27.43	25.59
Bra002151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	25.74	25.1

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.4	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra014661	EnsemblPlants:Bra014661.1
EnsemblPlants:Bra014661.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4DDU2
InterPro:MIP	PFAM:PF00230	PRINTS:PR00783	PANTHER:PTHR19139	PANTHER:PTHR19139:SF128	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI000254476D	:	:	:	:

Description

AT3G56950 (E=5e-123) SIP2;1, SIP2 | SIP2;1; transporter

Coordinates

chrA04:+:2090218..2091863

Molecular Weight (calculated)

25897.4 Da

IEP (calculated)

10.057

GRAVY (calculated)

0.676

Length

237 amino acids

Sequence
(BLAST)

001: MGRIGIVVSD LVLSFMWTWA GVLVNILVHG VLGFSRKDTT GEIVRYLFSV ISMFVFAFLQ KLSKGGLYNP LTALAAGVTG GFSNFIFTVL VRIPVEVIGS
101: ILGVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVM LSLGLARKIP GSFFMKTWIG SIAKLTLHVL GADLTGGCMN PAAVMGWAYA RGEHITQEHL
201: LVYWLGPIKA TLLAVWFFNV VFKPLTEEEE KPKAKTD

Best Arabidopsis Sequence Match ( AT3G56950.2 )
(BLAST)

001: MGRIGLVVTD LVLSFMWIWA GVLVNILVHG VLGFSRTDPS GEIVRYLFSI ISMFIFAYLQ QATKGGLYNP LTALAAGVSG GFSSFIFSVF VRIPVEVIGS
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN PAAVMGWAYA RGEHITKEHL
201: LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSEFCN VFFFYVANST VSTSSIKSEI

Arabidopsis Description

SIP2;1Small and basic intrinsic protein 21 [Source:UniProtKB/TrEMBL;Acc:F4J0V0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.