CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 4
endoplasmic reticulum 3
plasma membrane 4
extracellular 2
vacuole 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028951_P001	Maize	plasma membrane	93.17	93.17
Os03t0320000-01	Rice	endoplasmic reticulum, plasma membrane	78.31	78.0
TraesCS4D01G179600.1	Wheat	plasma membrane	74.3	74.3
TraesCS4A01G126900.1	Wheat	plasma membrane	74.3	73.12
TraesCS4B01G178000.2	Wheat	plasma membrane	73.49	61.41
GSMUA_Achr5P27600_001	Banana	extracellular	54.22	56.72
VIT_08s0040g00400.t01	Wine grape	endoplasmic reticulum	50.2	51.87
CDX76020	Canola	extracellular, mitochondrion	20.08	51.02
KRH66640	Soybean	extracellular	45.78	49.57
Bra014661.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	46.18	48.52
Solyc01g056720.2.1	Tomato	endoplasmic reticulum, extracellular	41.77	48.15
KRG95000	Soybean	extracellular	45.38	47.88
CDY08683	Canola	endoplasmic reticulum, extracellular, plasma membrane	45.38	47.68
CDY47387	Canola	endoplasmic reticulum, extracellular, plasma membrane	45.38	47.68
CDY51268	Canola	endoplasmic reticulum, extracellular, plasma membrane	44.98	47.06
Bra003257.1-P	Field mustard	plasma membrane	44.58	46.64
CDX67665	Canola	plasma membrane	44.58	46.64
CDX72093	Canola	endoplasmic reticulum, plasma membrane, vacuole	16.87	46.15
AT3G56950.2	Thale cress	plasma membrane	48.19	46.15
CDY27177	Canola	endoplasmic reticulum, extracellular, plasma membrane	42.97	45.73
Bra007285.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	42.17	44.87
CDX72092	Canola	extracellular	16.87	42.0
EES08298	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	32.13	32.52
EES19498	Sorghum	plasma membrane	31.73	32.51

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.4	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	UniProt:C5X1T8	EnsemblPlants:EER92349
ProteinID:EER92349	ProteinID:EER92349.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	PFAM:PF00230	PANTHER:PTHR19139
PANTHER:PTHR19139:SF128	EnsemblPlantsGene:SORBI_3001G389900	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0001A82ABE	RefSeq:XP_002465351.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:67642857..67645670

Molecular Weight (calculated)

26757.1 Da

IEP (calculated)

10.190

GRAVY (calculated)

0.459

Length

249 amino acids

Sequence
(BLAST)

001: MSPAPSRPRI RPWLVVGDLA LAAAWVCAGA LVKLLVYGGL GLAGRPEAEA VKVSLSIVYM FIFAWLEVAL GGASYNPLTV LAAALASHGG PAVYVFTAFA
101: RIPAQVIGAV LGVNLIQLTF PNVGKGARLS VGAHHGALAE GLATFMVVMV SVTLKKKEMK SFFMKTWITS MWKNTIHILS SDITGGIMNP ASAFAWAYAR
201: GDHTTFDHLL VYWLAPLQAT LLGVWAVTYL TKSKKIKEQE ADENKTKKE

Best Arabidopsis Sequence Match ( AT3G56950.2 )
(BLAST)

001: MGRIGLVVTD LVLSFMWIWA GVLVNILVHG VLGFSRTDPS GEIVRYLFSI ISMFIFAYLQ QATKGGLYNP LTALAAGVSG GFSSFIFSVF VRIPVEVIGS
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN PAAVMGWAYA RGEHITKEHL
201: LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSEFCN VFFFYVANST VSTSSIKSEI

Arabidopsis Description

SIP2;1Small and basic intrinsic protein 21 [Source:UniProtKB/TrEMBL;Acc:F4J0V0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.