Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g056720.2.1 | Tomato | endoplasmic reticulum, extracellular | 54.62 | 60.19 |
| VIT_08s0040g00400.t01 | Wine grape | endoplasmic reticulum | 59.66 | 58.92 |
| CDX76020 | Canola | extracellular, mitochondrion | 23.53 | 57.14 |
| KRG95000 | Soybean | extracellular | 55.46 | 55.93 |
| Zm00001d028951_P001 | Maize | plasma membrane | 57.98 | 55.42 |
| KRH66640 | Soybean | extracellular | 52.94 | 54.78 |
| EER92349 | Sorghum | endoplasmic reticulum, plasma membrane | 56.72 | 54.22 |
| Os03t0320000-01 | Rice | endoplasmic reticulum, plasma membrane | 56.72 | 54.0 |
| Bra014661.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 53.36 | 53.59 |
| CDY08683 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 52.94 | 53.16 |
| CDY47387 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 52.94 | 53.16 |
| CDY51268 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 52.94 | 52.94 |
| TraesCS4D01G179600.1 | Wheat | plasma membrane | 54.62 | 52.21 |
| TraesCS4A01G126900.1 | Wheat | plasma membrane | 55.46 | 52.17 |
| CDX72093 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 19.75 | 51.65 |
| Bra003257.1-P | Field mustard | plasma membrane | 51.26 | 51.26 |
| CDX67665 | Canola | plasma membrane | 51.26 | 51.26 |
| Bra007285.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 50.0 | 50.85 |
| CDY27177 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 49.58 | 50.43 |
| AT3G56950.2 | Thale cress | plasma membrane | 52.94 | 48.46 |
| CDX72092 | Canola | extracellular | 18.49 | 44.0 |
| GSMUA_Achr5P21450_001 | Banana | plasma membrane | 47.9 | 43.68 |
| TraesCS4B01G178000.2 | Wheat | plasma membrane | 54.62 | 43.62 |
| GSMUA_Achr11P... | Banana | plasma membrane | 30.25 | 30.25 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.4 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:GSMUA_Achr5G27600_001 | EnsemblPlants:GSMUA_Achr5P27600_001 | EnsemblPlants:GSMUA_Achr5T27600_001 | InterPro:IPR023271 | UniProt:M0T285 |
| InterPro:MIP | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF128 | SUPFAM:SSF81338 |
| TMHMM:TMhelix | UniParc:UPI00029643F6 | : | : | : | : |
Description
Aquaporin SIP2-1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G27600_001]
Coordinates
chr5:-:28050849..28055192
Molecular Weight (calculated)
25958.2 Da
IEP (calculated)
10.082
GRAVY (calculated)
0.436
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRLGLVMCD AAMSFMWVWA GALVKLLVYD ALGLGHRPGG EALKMALVVG YMFLFAWLGH VTRGGAYNPL TVLSYAFSGG PEGFLFTALG RIPAQVIGSA
101: TGVRFIKQTF PSIGHGPRLS IDIHRGAWTE GFLTFMIVMA SLMLKKKDPG SFFMKTWISS IFKLALNVLG SDLTGGIMNP ASAFAWAYAR GDHITLDQLI
201: VYWFAPIQAT LLAVWTFGLL TEPKSKVQKA EENKVKSE
101: TGVRFIKQTF PSIGHGPRLS IDIHRGAWTE GFLTFMIVMA SLMLKKKDPG SFFMKTWISS IFKLALNVLG SDLTGGIMNP ASAFAWAYAR GDHITLDQLI
201: VYWFAPIQAT LLAVWTFGLL TEPKSKVQKA EENKVKSE
001: MGRIGLVVTD LVLSFMWIWA GVLVNILVHG VLGFSRTDPS GEIVRYLFSI ISMFIFAYLQ QATKGGLYNP LTALAAGVSG GFSSFIFSVF VRIPVEVIGS
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN PAAVMGWAYA RGEHITKEHL
201: LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSEFCN VFFFYVANST VSTSSIKSEI
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN PAAVMGWAYA RGEHITKEHL
201: LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSEFCN VFFFYVANST VSTSSIKSEI
Arabidopsis Description
SIP2;1Small and basic intrinsic protein 21 [Source:UniProtKB/TrEMBL;Acc:F4J0V0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.