Factsheet for Zm00001d028951_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 4
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92349	Sorghum	endoplasmic reticulum, plasma membrane	93.17	93.17
Os03t0320000-01	Rice	endoplasmic reticulum, plasma membrane	79.92	79.6
TraesCS4D01G179600.1	Wheat	plasma membrane	75.9	75.9
TraesCS4A01G126900.1	Wheat	plasma membrane	75.9	74.7
TraesCS4B01G178000.2	Wheat	plasma membrane	75.5	63.09
GSMUA_Achr5P27600_001	Banana	extracellular	55.42	57.98
CDX76020	Canola	extracellular, mitochondrion	20.88	53.06
VIT_08s0040g00400.t01	Wine grape	endoplasmic reticulum	50.2	51.87
KRH66640	Soybean	extracellular	46.59	50.43
Bra014661.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	47.79	50.21
CDY08683	Canola	endoplasmic reticulum, extracellular, plasma membrane	46.99	49.37
CDY47387	Canola	endoplasmic reticulum, extracellular, plasma membrane	46.99	49.37
CDX72093	Canola	endoplasmic reticulum, plasma membrane, vacuole	17.67	48.35
CDY51268	Canola	endoplasmic reticulum, extracellular, plasma membrane	46.18	48.32
KRG95000	Soybean	extracellular	45.78	48.31
Bra003257.1-P	Field mustard	plasma membrane	45.78	47.9
CDX67665	Canola	plasma membrane	45.78	47.9
Solyc01g056720.2.1	Tomato	endoplasmic reticulum, extracellular	40.96	47.22
CDY27177	Canola	endoplasmic reticulum, extracellular, plasma membrane	43.78	46.58
AT3G56950.2	Thale cress	plasma membrane	47.79	45.77
Bra007285.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	42.97	45.73
CDX72092	Canola	extracellular	16.87	42.0
Zm00001d010325_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	32.13	32.92
Zm00001d048959_P002	Maize	endoplasmic reticulum, extracellular, vacuole	30.12	31.91
Zm00001d044543_P001	Maize	plastid	22.89	22.53
Zm00001d032015_P001	Maize	plastid	22.09	22.0
Zm00001d017903_P001	Maize	cytosol	25.3	14.89

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.4	EntrezGene:542646	EMBL:AF326499	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
UniProt:B6TC82	EMBL:EU962597	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	ProteinID:ONL97473.1
PFAM:PF00230	PANTHER:PTHR19139	PANTHER:PTHR19139:SF128	UniProt:Q9ATM1	SUPFAM:SSF81338	TMHMM:TMhelix
UniParc:UPI00000A95E5	EnsemblPlantsGene:Zm00001d028951	EnsemblPlants:Zm00001d028951_P001	EnsemblPlants:Zm00001d028951_T001	SEG:seg	:

Description

small basic membrane intrinsic protein2a small basic membrane intrinsic protein2a

Coordinates

chr1:-:52645733..52648243

Molecular Weight (calculated)

26752.2 Da

IEP (calculated)

10.472

GRAVY (calculated)

0.461

Length

249 amino acids

Sequence
(BLAST)

001: MSPAPSRPRI RPWLVVGDLA LAAAWVCAGA LVKLLVYGGL GLGGRPEAEA VKVSLSLVYM FLFAWLEAAS GGASYNPLTV LAAALASHGG PAVYLFTAFA
101: RIPAQVIGAV LGVKLIQVTF PNVGKGARLS VGAHHGALAE GLATFMVVMV SVTLKKKEMK SFFMKTWITS IWKNTIHLLS SDITGGIMNP ASAFAWAYAR
201: GDHTTFDHLL VYWLAPLQAT LLGVWAVTFF TKPKKIKEQK VDENKIKKE

Best Arabidopsis Sequence Match ( AT3G56950.2 )
(BLAST)

001: MGRIGLVVTD LVLSFMWIWA GVLVNILVHG VLGFSRTDPS GEIVRYLFSI ISMFIFAYLQ QATKGGLYNP LTALAAGVSG GFSSFIFSVF VRIPVEVIGS
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN PAAVMGWAYA RGEHITKEHL
201: LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSEFCN VFFFYVANST VSTSSIKSEI

Arabidopsis Description

SIP2;1Small and basic intrinsic protein 21 [Source:UniProtKB/TrEMBL;Acc:F4J0V0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.