Skip to main content
crop-pal logo
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51268 Canola endoplasmic reticulum, extracellular, plasma membrane 81.92 89.5
Bra014661.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 80.0 87.76
Bra003257.1-P Field mustard plasma membrane 79.62 86.97
CDX67665 Canola plasma membrane 79.62 86.97
CDX76020 Canola extracellular, mitochondrion 32.31 85.71
CDY08683 Canola endoplasmic reticulum, extracellular, plasma membrane 78.08 85.65
CDY47387 Canola endoplasmic reticulum, extracellular, plasma membrane 78.08 85.65
Bra007285.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 72.31 80.34
CDY27177 Canola endoplasmic reticulum, extracellular, plasma membrane 72.31 80.34
CDX72093 Canola endoplasmic reticulum, plasma membrane, vacuole 28.08 80.22
CDX72092 Canola extracellular 30.38 79.0
VIT_08s0040g00400.t01 Wine grape endoplasmic reticulum 57.69 62.24
KRG95000 Soybean extracellular 55.0 60.59
KRH66640 Soybean extracellular 52.69 59.57
Solyc01g056720.2.1 Tomato endoplasmic reticulum, extracellular 48.85 58.8
GSMUA_Achr5P27600_001 Banana extracellular 48.46 52.94
EER92349 Sorghum endoplasmic reticulum, plasma membrane 46.15 48.19
Zm00001d028951_P001 Maize plasma membrane 45.77 47.79
Os03t0320000-01 Rice endoplasmic reticulum, plasma membrane 45.77 47.6
TraesCS4D01G179600.1 Wheat plasma membrane 43.85 45.78
TraesCS4A01G126900.1 Wheat plasma membrane 44.23 45.45
GSMUA_Achr5P21450_001 Banana plasma membrane 40.0 39.85
TraesCS4B01G178000.2 Wheat plasma membrane 43.85 38.26
AT5G18290.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 25.0 26.75
AT3G04090.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 24.62 26.67
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.4EntrezGene:824862ProteinID:AEE79591.1ProteinID:AEE79592.1EMBL:AF387020
ArrayExpress:AT3G56950EnsemblPlantsGene:AT3G56950RefSeq:AT3G56950TAIR:AT3G56950RefSeq:AT3G56950-TAIR-GEnsemblPlants:AT3G56950.2
TAIR:AT3G56950.2EMBL:AY087153InterPro:Aquaporin-likeInterPro:Aquaporin_transptrUnigene:At.70999EMBL:BT006280
ProteinID:CAB72165.1UniProt:F4J0V0GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0005886GO:GO:0005887
GO:GO:0006810GO:GO:0006833GO:GO:0008150GO:GO:0015250GO:GO:0015267GO:GO:0016020
GO:GO:0016021GO:GO:0034220GO:GO:0055085InterPro:IPR023271InterPro:MIPRefSeq:NP_001190113.1
RefSeq:NP_191254.1ProteinID:OAP03353.1PFAM:PF00230PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009001
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009015PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0009066PO:PO:0009073PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281PRINTS:PR00783PANTHER:PTHR19139
PANTHER:PTHR19139:SF128Symbol:SIP2;1SUPFAM:SSF81338TMHMM:TMhelixUniParc:UPI0001E92E4ESEG:seg
Description
SIP2;1Small and basic intrinsic protein 21 [Source:UniProtKB/TrEMBL;Acc:F4J0V0]
Coordinates
chr3:-:21078297..21079856
Molecular Weight (calculated)
28519.5 Da
IEP (calculated)
9.916
GRAVY (calculated)
0.673
Length
260 amino acids
Sequence
(BLAST)
001: MGRIGLVVTD LVLSFMWIWA GVLVNILVHG VLGFSRTDPS GEIVRYLFSI ISMFIFAYLQ QATKGGLYNP LTALAAGVSG GFSSFIFSVF VRIPVEVIGS
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN PAAVMGWAYA RGEHITKEHL
201: LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSEFCN VFFFYVANST VSTSSIKSEI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.