Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007285.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 87.0 | 37.18 |
| CDY27177 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 87.0 | 37.18 |
| CDY51268 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 88.0 | 36.97 |
| CDX67665 | Canola | plasma membrane | 87.0 | 36.55 |
| CDY08683 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 84.0 | 35.44 |
| CDY47387 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 84.0 | 35.44 |
| AT3G56950.2 | Thale cress | plasma membrane | 79.0 | 30.38 |
| KRH66640 | Soybean | extracellular | 50.0 | 21.74 |
| KRG95000 | Soybean | extracellular | 48.0 | 20.34 |
| VIT_08s0040g00400.t01 | Wine grape | endoplasmic reticulum | 48.0 | 19.92 |
| GSMUA_Achr5P27600_001 | Banana | extracellular | 44.0 | 18.49 |
| TraesCS4D01G179600.1 | Wheat | plasma membrane | 45.0 | 18.07 |
| TraesCS4A01G126900.1 | Wheat | plasma membrane | 45.0 | 17.79 |
| Zm00001d028951_P001 | Maize | plasma membrane | 42.0 | 16.87 |
| EER92349 | Sorghum | endoplasmic reticulum, plasma membrane | 42.0 | 16.87 |
| Os03t0320000-01 | Rice | endoplasmic reticulum, plasma membrane | 42.0 | 16.8 |
| Solyc01g056720.2.1 | Tomato | endoplasmic reticulum, extracellular | 35.0 | 16.2 |
| TraesCS4B01G178000.2 | Wheat | plasma membrane | 45.0 | 15.1 |
| GSMUA_Achr5P21450_001 | Banana | plasma membrane | 34.0 | 13.03 |
| CDY66671 | Canola | endoplasmic reticulum, extracellular, vacuole | 18.0 | 7.41 |
| CDY38504 | Canola | endoplasmic reticulum, extracellular, vacuole | 18.0 | 7.41 |
| CDY50883 | Canola | extracellular, plasma membrane | 17.0 | 7.11 |
| CDY42904 | Canola | plasma membrane | 17.0 | 7.11 |
| CDX76020 | Canola | extracellular, mitochondrion | 2.0 | 2.04 |
| CDX72093 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX72092 | EnsemblPlantsGene:GSBRNA2T00155892001 | GO:A0A078C5B4 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | InterPro:IPR023271 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF128 | ProteinID:CDX72092 | ProteinID:CDX72092.1 | SEG:seg | SUPFAM:SSF81338 |
| TMHMM:TMhelix | UniParc:UPI0004EDBB79 | MapMan:35.1 | : | : | : |
Description
BnaC08g27820D
Coordinates
chrLK031795:+:2368758..2369169
Molecular Weight (calculated)
10672.4 Da
IEP (calculated)
10.322
GRAVY (calculated)
1.151
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MGRISIVVSD LVLSFMWIWA GVLVNILVHG VLGFSRKDTT GEIVGYIFSV ISMFVFAFLQ KLTKGGHYNP VAALASGVSG GFGSFIFTVM VRVIGSVLAV
001: MGRIGLVVTD LVLSFMWIWA GVLVNILVHG VLGFSRTDPS GEIVRYLFSI ISMFIFAYLQ QATKGGLYNP LTALAAGVSG GFSSFIFSVF VRIPVEVIGS
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN PAAVMGWAYA RGEHITKEHL
201: LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSE
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN PAAVMGWAYA RGEHITKEHL
201: LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSE
Arabidopsis Description
SIP2;1Small and basic intrinsic protein 21 [Source:UniProtKB/TrEMBL;Acc:F4J0V0]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.