Factsheet for GSMUA_Achr5P21450_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plastid 1
endoplasmic reticulum 2
plasma membrane 4
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72093	Canola	endoplasmic reticulum, plasma membrane, vacuole	17.62	50.55
KRH66640	Soybean	extracellular	44.44	50.43
KRG95000	Soybean	extracellular	45.21	50.0
VIT_08s0040g00400.t01	Wine grape	endoplasmic reticulum	45.98	49.79
CDX76020	Canola	extracellular, mitochondrion	18.39	48.98
Solyc01g056720.2.1	Tomato	endoplasmic reticulum, extracellular	39.85	48.15
GSMUA_Achr5P27600_001	Banana	extracellular	43.68	47.9
CDY51268	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.61	44.54
Bra003257.1-P	Field mustard	plasma membrane	40.23	44.12
CDX67665	Canola	plasma membrane	40.23	44.12
CDY47387	Canola	endoplasmic reticulum, extracellular, plasma membrane	39.08	43.04
CDY08683	Canola	endoplasmic reticulum, extracellular, plasma membrane	39.08	43.04
Bra014661.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	39.08	43.04
CDY27177	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.55	41.88
Bra007285.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	37.55	41.88
AT3G56950.2	Thale cress	plasma membrane	39.85	40.0
CDX72092	Canola	extracellular	13.03	34.0
GSMUA_Achr11P...	Banana	plasma membrane	25.67	28.15

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.4	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr5G21450_001	EnsemblPlants:GSMUA_Achr5P21450_001	EnsemblPlants:GSMUA_Achr5T21450_001	InterPro:IPR023271	UniProt:M0T0H4
InterPro:MIP	PFAM:PF00230	PRINTS:PR00783	PANTHER:PTHR19139	PANTHER:PTHR19139:SF128	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI00029622FE	:	:	:	:

Description

Putative Probable aquaporin SIP2-1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G21450_001]

Coordinates

chr5:-:23588489..23597430

Molecular Weight (calculated)

29301.1 Da

IEP (calculated)

9.372

GRAVY (calculated)

0.342

Length

261 amino acids

Sequence
(BLAST)

001: MLDQKEFVNK KETDVEEEKE HSNQASRVKL IVSDSFLSFM WVLSGSVIRY LIYMILGTGM DPISVLLKGY LALVYLYYFS QLRKVTNGGT YNPLFVLCHA
101: ISDNFVEFLY AVFGRIPAQV LGSVIGVWLI NATFPAAANG PRLNVDVSYG ALIEGLITFA IIIVSLGLNK FPRSSHKTWI SSFAKLALHV LASDITGGVM
201: NPASAFGWAY AQGKHLTKEH LCVYWLAPLE ATLLVVWICS LFIKLPKRKR QHEMQYKDKL V

Best Arabidopsis Sequence Match ( AT3G56950.1 )
(BLAST)

001: MGRIGLVVTD LVLSFMWIWA GVLVNILVHG VLGFSRTDPS GEIVRYLFSI ISMFIFAYLQ QATKGGLYNP LTALAAGVSG GFSSFIFSVF VRIPVEVIGS
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN PAAVMGWAYA RGEHITKEHL
201: LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSE

Arabidopsis Description

SIP2;1Small and basic intrinsic protein 21 [Source:UniProtKB/TrEMBL;Acc:F4J0V0]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.