CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum

Predictor Summary:

plastid 1
extracellular 5
golgi 4
plasma membrane 5
endoplasmic reticulum 5
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007285.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	95.73	95.73
CDX72092	Canola	extracellular	37.18	87.0
CDX76020	Canola	extracellular, mitochondrion	34.62	82.65
CDY51268	Canola	endoplasmic reticulum, extracellular, plasma membrane	82.05	80.67
CDX72093	Canola	endoplasmic reticulum, plasma membrane, vacuole	30.77	79.12
CDX67665	Canola	plasma membrane	79.49	78.15
CDY08683	Canola	endoplasmic reticulum, extracellular, plasma membrane	79.06	78.06
CDY47387	Canola	endoplasmic reticulum, extracellular, plasma membrane	79.06	78.06
AT3G56950.2	Thale cress	plasma membrane	80.34	72.31
VIT_08s0040g00400.t01	Wine grape	endoplasmic reticulum	61.11	59.34
KRH66640	Soybean	extracellular	55.98	56.96
KRG95000	Soybean	extracellular	56.41	55.93
Solyc01g056720.2.1	Tomato	endoplasmic reticulum, extracellular	50.0	54.17
GSMUA_Achr5P27600_001	Banana	extracellular	50.43	49.58
Os03t0320000-01	Rice	endoplasmic reticulum, plasma membrane	47.01	44.0
Zm00001d028951_P001	Maize	plasma membrane	46.58	43.78
EER92349	Sorghum	endoplasmic reticulum, plasma membrane	45.73	42.97
TraesCS4D01G179600.1	Wheat	plasma membrane	44.87	42.17
TraesCS4A01G126900.1	Wheat	plasma membrane	45.3	41.9
GSMUA_Achr5P21450_001	Banana	plasma membrane	41.88	37.55
TraesCS4B01G178000.2	Wheat	plasma membrane	44.87	35.23
CDY50883	Canola	extracellular, plasma membrane	24.79	24.27
CDY42904	Canola	plasma membrane	24.36	23.85
CDY66671	Canola	endoplasmic reticulum, extracellular, vacuole	23.5	22.63
CDY38504	Canola	endoplasmic reticulum, extracellular, vacuole	23.5	22.63

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.4	GO:A0A078GPP8	UniProt:A0A078GPP8	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlants:CDY27177	ProteinID:CDY27177	ProteinID:CDY27177.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00037044001	InterPro:IPR023271	InterPro:MIP	PFAM:PF00230	PRINTS:PR00783	PANTHER:PTHR19139
PANTHER:PTHR19139:SF128	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0004EE8C67	:	:

Description

BnaA09g36250DBnaA09g36250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPP8]

Coordinates

chrLK032201:+:23247..24113

Molecular Weight (calculated)

25571.9 Da

IEP (calculated)

9.786

GRAVY (calculated)

0.650

Length

234 amino acids

Sequence
(BLAST)

001: MSRISIVVSD LVLSFMWIWS GVLVSILVHG VLGFSRNVTT GEIVGYTFSV ISMFIFAFLQ KLTKGGHYNP VAALASGGFG SFIFTIMVRV PAEVIGSILA
101: VKHIIHVFPE IGKGPKLNVS IHQGALTEGV LTFFTVLISM ELSRKIPGSF FMKTWISSIA KLSLHVLGAD LTGGYMNPAA VMGWAYARGE HITKEHLLVY
201: CLGPVMATLL AVWFYNVVLK PLTEEHEKPK AKSE

Best Arabidopsis Sequence Match ( AT3G56950.2 )
(BLAST)

001: MGRIGLVVTD LVLSFMWIWA GVLVNILVHG VLGFSRTDPS GEIVRYLFSI ISMFIFAYLQ QATKGGLYNP LTALAAGVSG GFSSFIFSVF VRIPVEVIGS
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN PAAVMGWAYA RGEHITKEHL
201: LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSEFCN VFFFYVANST VSTSSIKSEI

Arabidopsis Description

SIP2;1Small and basic intrinsic protein 21 [Source:UniProtKB/TrEMBL;Acc:F4J0V0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.