Factsheet for Os03t0320000-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 1
plastid 3
endoplasmic reticulum 3
plasma membrane 4
extracellular 2
vacuole 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028951_P001	Maize	plasma membrane	79.6	79.92
EER92349	Sorghum	endoplasmic reticulum, plasma membrane	78.0	78.31
TraesCS4D01G179600.1	Wheat	plasma membrane	75.6	75.9
TraesCS4A01G126900.1	Wheat	plasma membrane	74.8	73.91
TraesCS4B01G178000.2	Wheat	plasma membrane	74.8	62.75
GSMUA_Achr5P27600_001	Banana	extracellular	54.0	56.72
CDX76020	Canola	extracellular, mitochondrion	20.4	52.04
VIT_08s0040g00400.t01	Wine grape	endoplasmic reticulum	49.2	51.04
CDX72093	Canola	endoplasmic reticulum, plasma membrane, vacuole	18.4	50.55
KRH66640	Soybean	extracellular	46.4	50.43
CDY51268	Canola	endoplasmic reticulum, extracellular, plasma membrane	47.2	49.58
CDX67665	Canola	plasma membrane	46.8	49.16
Bra003257.1-P	Field mustard	plasma membrane	46.8	49.16
KRG95000	Soybean	extracellular	46.4	49.15
Bra014661.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	46.4	48.95
Solyc01g056720.2.1	Tomato	endoplasmic reticulum, extracellular	42.0	48.61
CDY47387	Canola	endoplasmic reticulum, extracellular, plasma membrane	46.0	48.52
CDY08683	Canola	endoplasmic reticulum, extracellular, plasma membrane	46.0	48.52
CDY27177	Canola	endoplasmic reticulum, extracellular, plasma membrane	44.0	47.01
Bra007285.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	43.2	46.15
AT3G56950.2	Thale cress	plasma membrane	47.6	45.77
CDX72092	Canola	extracellular	16.8	42.0
Os01t0182200-02	Rice	endoplasmic reticulum, plasma membrane	30.4	30.89

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.4	ProteinID:ABF95655.1	EMBL:AK071190	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
ProteinID:BAF11864.1	ProteinID:BAS83928.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	EnsemblPlantsGene:Os03g0320000	EnsemblPlants:Os03t0320000-01
PFAM:PF00230	PANTHER:PTHR19139	PANTHER:PTHR19139:SF128	UniProt:Q10M80	SUPFAM:SSF81338	TMHMM:TMhelix
UniParc:UPI0000DB4208	SEG:seg	:	:	:	:

Description

SMALL AND BASIC INTRINSIC PROTEIN 1;2Similar to Small basic membrane integral protein ZmSIP2-1. (Os03t0320000-01)

Coordinates

chr3:-:11546582..11549036

Molecular Weight (calculated)

26850.4 Da

IEP (calculated)

10.321

GRAVY (calculated)

0.512

Length

250 amino acids

Sequence
(BLAST)

001: MSPAPPPSRG RIRPWLVVGD LVVAAMWVCA GALVKLAVYG VLGLGGRPEA DAVKVALSLV YMFFFAWLEG FTGGASYNPL TVLAGALASR AGPSLYLFAA
101: FVRMPAQVFG SILGVKLIRA ALPKVGKGAP LSVGVHHGAL AEGLATFMVV IVSVTLKKKE MKGFFMKTWI SSIWKMTFHL LSSDITGGVM NPASAFAWAY
201: ARGDHTTFDH LLVYWLAPLQ ATLLGVWVVT LLTKPKKIEE EADESKTKKE

Best Arabidopsis Sequence Match ( AT3G56950.2 )
(BLAST)

001: MGRIGLVVTD LVLSFMWIWA GVLVNILVHG VLGFSRTDPS GEIVRYLFSI ISMFIFAYLQ QATKGGLYNP LTALAAGVSG GFSSFIFSVF VRIPVEVIGS
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN PAAVMGWAYA RGEHITKEHL
201: LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSEFCN VFFFYVANST VSTSSIKSEI

Arabidopsis Description

SIP2;1Small and basic intrinsic protein 21 [Source:UniProtKB/TrEMBL;Acc:F4J0V0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.