Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 7
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G137500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 84.55 | 85.25 |
| TraesCS4D01G132200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 84.15 | 84.84 |
| EES19498 | Sorghum | plasma membrane | 83.74 | 84.77 |
| TraesCS4A01G180200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 83.33 | 84.71 |
| Zm00001d010325_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 82.93 | 83.95 |
| Zm00001d048959_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 70.73 | 74.04 |
| EES08298 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 72.36 | 72.36 |
| GSMUA_Achr11P... | Banana | plasma membrane | 65.85 | 68.07 |
| VIT_08s0007g07680.t01 | Wine grape | extracellular, plasma membrane, vacuole | 59.76 | 61.76 |
| KRG94774 | Soybean | plasma membrane | 61.79 | 61.29 |
| KRH06755 | Soybean | plasma membrane | 61.38 | 60.89 |
| Solyc10g078490.1.1 | Tomato | nucleus | 58.94 | 59.67 |
| PGSC0003DMT400021557 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 57.32 | 58.02 |
| KRH70120 | Soybean | extracellular, plasma membrane, vacuole | 56.5 | 56.28 |
| KRH08462 | Soybean | extracellular, plasma membrane, vacuole | 55.28 | 55.51 |
| PGSC0003DMT400048461 | Potato | extracellular | 52.03 | 53.56 |
| Solyc12g019690.1.1 | Tomato | extracellular, plasma membrane, vacuole | 52.03 | 52.89 |
| CDY50883 | Canola | extracellular, plasma membrane | 51.22 | 52.72 |
| Bra031946.1-P | Field mustard | extracellular, plasma membrane | 51.22 | 52.72 |
| CDY42904 | Canola | plasma membrane | 51.22 | 52.72 |
| AT3G04090.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 50.41 | 51.67 |
| Bra040150.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 52.85 | 51.18 |
| CDY38504 | Canola | endoplasmic reticulum, extracellular, vacuole | 48.37 | 48.97 |
| CDY66671 | Canola | endoplasmic reticulum, extracellular, vacuole | 48.37 | 48.97 |
| Bra002151.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 48.37 | 48.97 |
| KRH25362 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 47.56 | 48.95 |
| KRH56152 | Soybean | extracellular | 47.15 | 48.54 |
| AT5G18290.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 47.15 | 47.74 |
| Zm00001d044543_P001 | Maize | plastid | 45.12 | 43.87 |
| Zm00001d032015_P001 | Maize | plastid | 44.31 | 43.6 |
| Solyc10g078500.1.1 | Tomato | extracellular | 17.48 | 41.35 |
| Os03t0320000-01 | Rice | endoplasmic reticulum, plasma membrane | 30.89 | 30.4 |
| Zm00001d017903_P001 | Maize | cytosol | 48.37 | 28.13 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.4 | EntrezGene:4325361 | EMBL:AK106185 | EMBL:AK109424 | InterPro:Aquaporin-like |
| InterPro:Aquaporin_transptr | ProteinID:BAB32914.1 | ProteinID:BAD68048.1 | ProteinID:BAF04130.1 | ProteinID:BAS70739.1 | ProteinID:EAZ10802.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | InterPro:IPR023271 | InterPro:MIP | EnsemblPlantsGene:Os01g0182200 |
| EnsemblPlants:Os01t0182200-02 | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF75 | UniProt:Q5VR89 |
| SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI00000A9339 | RefSeq:XP_015621893.1 | SEG:seg | : |
Description
SMALL AND BASIC INTRINSIC PROTEIN 1;1Similar to cDNA clone:001-208-D07, full insert sequence. (Os01t0182200-01);Similar to Small basic membrane integral protein ZmSIP1-2. (Os01t0182200-02)
Coordinates
chr1:-:4313699..4315812
Molecular Weight (calculated)
26053.1 Da
IEP (calculated)
9.646
GRAVY (calculated)
0.697
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAAVRAAA ADAAVTFLWV LCVSTLGAST AAVTSYLRIH EGIHYALLVT VSLLSVLLFA FNLLCDALGG ASFNPTALAA FHAAGLSSPR HSSLFPLALR
101: FPAQAAGAVG GAMAISELMP EQYKHMLGGP SLKVDLHTGA AAELVLTFVI TLAVLWIIVK GPRNPIVKTW MLSISTVCLV LTGAAYTGPS MNPANAFGWA
201: YVNNRHNTWE QFYVYWICPF VGAVLAAWVF RAVFPPPAPK PKAKKA
101: FPAQAAGAVG GAMAISELMP EQYKHMLGGP SLKVDLHTGA AAELVLTFVI TLAVLWIIVK GPRNPIVKTW MLSISTVCLV LTGAAYTGPS MNPANAFGWA
201: YVNNRHNTWE QFYVYWICPF VGAVLAAWVF RAVFPPPAPK PKAKKA
001: MMGVLKSAIG DMLMTFSWVV LSATFGIQTA AIISAGDFQA ITWAPLVILT SLIFVYVSIF TVIFGSASFN PTGSAAFYVA GVPGDTLFSL AIRLPAQAIG
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA
Arabidopsis Description
SIP1-1SIP1A [Source:UniProtKB/TrEMBL;Acc:A0A178V5Y6]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.