Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42904 | Canola | plasma membrane | 88.75 | 89.12 |
| CDY50883 | Canola | extracellular, plasma membrane | 88.75 | 89.12 |
| Bra031946.1-P | Field mustard | extracellular, plasma membrane | 88.33 | 88.7 |
| Bra040150.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 87.5 | 82.68 |
| AT5G18290.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 72.08 | 71.19 |
| KRG94774 | Soybean | plasma membrane | 61.67 | 59.68 |
| KRH06755 | Soybean | plasma membrane | 60.83 | 58.87 |
| KRH08462 | Soybean | extracellular, plasma membrane, vacuole | 57.08 | 55.92 |
| KRH70120 | Soybean | extracellular, plasma membrane, vacuole | 55.83 | 54.25 |
| EES19498 | Sorghum | plasma membrane | 53.75 | 53.09 |
| GSMUA_Achr11P... | Banana | plasma membrane | 52.5 | 52.94 |
| TraesCS4A01G180200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 53.33 | 52.89 |
| TraesCS4D01G132200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 53.75 | 52.87 |
| TraesCS4B01G137500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 53.33 | 52.46 |
| Zm00001d010325_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 52.5 | 51.85 |
| Os01t0182200-02 | Rice | endoplasmic reticulum, plasma membrane | 51.67 | 50.41 |
| Zm00001d048959_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 45.83 | 46.81 |
| EES08298 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 47.92 | 46.75 |
| Zm00001d044543_P001 | Maize | plastid | 30.0 | 28.46 |
| Zm00001d032015_P001 | Maize | plastid | 29.58 | 28.4 |
| AT3G56950.2 | Thale cress | plasma membrane | 26.67 | 24.62 |
| Zm00001d017903_P001 | Maize | cytosol | 33.33 | 18.91 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.4 | EntrezGene:819564 | UniProt:A0A178V5Y6 | ProteinID:AAF26804.1 | ProteinID:AEE74036.1 |
| EMBL:AK226432 | ArrayExpress:AT3G04090 | EnsemblPlantsGene:AT3G04090 | RefSeq:AT3G04090 | TAIR:AT3G04090 | RefSeq:AT3G04090-TAIR-G |
| EnsemblPlants:AT3G04090.1 | TAIR:AT3G04090.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0015250 |
| GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | InterPro:IPR023271 |
| InterPro:MIP | RefSeq:NP_187059.1 | ProteinID:OAP01617.1 | PFAM:PF00230 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000282 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009015 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009066 | PO:PO:0009073 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00783 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF75 | UniProt:Q9M8W5 | Symbol:SIP1;1 |
| SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI00000A32BB | SEG:seg | : | : |
Description
SIP1-1SIP1A [Source:UniProtKB/TrEMBL;Acc:A0A178V5Y6]
Coordinates
chr3:-:1071984..1074244
Molecular Weight (calculated)
25707.9 Da
IEP (calculated)
10.262
GRAVY (calculated)
0.746
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGVLKSAIG DMLMTFSWVV LSATFGIQTA AIISAGDFQA ITWAPLVILT SLIFVYVSIF TVIFGSASFN PTGSAAFYVA GVPGDTLFSL AIRLPAQAIG
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.