Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES08298 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 92.34 | 88.21 |
| TraesCS4B01G137500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 76.17 | 73.36 |
| TraesCS4A01G180200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 75.32 | 73.14 |
| TraesCS4D01G132200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 75.32 | 72.54 |
| Zm00001d010325_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 73.62 | 71.19 |
| Os01t0182200-02 | Rice | endoplasmic reticulum, plasma membrane | 74.04 | 70.73 |
| GSMUA_Achr11P... | Banana | plasma membrane | 60.43 | 59.66 |
| VIT_08s0007g07680.t01 | Wine grape | extracellular, plasma membrane, vacuole | 58.3 | 57.56 |
| Zm00001d044543_P001 | Maize | plastid | 58.72 | 54.55 |
| Zm00001d032015_P001 | Maize | plastid | 57.87 | 54.4 |
| KRH06755 | Soybean | plasma membrane | 57.02 | 54.03 |
| KRG94774 | Soybean | plasma membrane | 56.17 | 53.23 |
| Solyc10g078490.1.1 | Tomato | nucleus | 54.04 | 52.26 |
| PGSC0003DMT400021557 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 52.77 | 51.03 |
| PGSC0003DMT400048461 | Potato | extracellular | 51.49 | 50.63 |
| KRH08462 | Soybean | extracellular, plasma membrane, vacuole | 52.77 | 50.61 |
| Solyc12g019690.1.1 | Tomato | extracellular, plasma membrane, vacuole | 51.49 | 50.0 |
| KRH70120 | Soybean | extracellular, plasma membrane, vacuole | 52.34 | 49.8 |
| CDY50883 | Canola | extracellular, plasma membrane | 47.23 | 46.44 |
| CDY42904 | Canola | plasma membrane | 47.23 | 46.44 |
| Bra031946.1-P | Field mustard | extracellular, plasma membrane | 47.23 | 46.44 |
| AT3G04090.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 46.81 | 45.83 |
| Bra040150.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 49.36 | 45.67 |
| KRH56152 | Soybean | extracellular | 46.38 | 45.61 |
| KRH25362 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 45.96 | 45.19 |
| CDY66671 | Canola | endoplasmic reticulum, extracellular, vacuole | 44.26 | 42.8 |
| CDY38504 | Canola | endoplasmic reticulum, extracellular, vacuole | 44.26 | 42.8 |
| Bra002151.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 44.26 | 42.8 |
| AT5G18290.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 43.83 | 42.39 |
| Zm00001d017903_P001 | Maize | cytosol | 59.15 | 32.86 |
| Solyc10g078500.1.1 | Tomato | extracellular | 14.04 | 31.73 |
| Zm00001d028951_P001 | Maize | plasma membrane | 31.91 | 30.12 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.4 | UniProt:A0A1D6PRA3 | ProteinID:AQK49247.1 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR023271 | InterPro:MIP | PFAM:PF00230 |
| PRINTS:PR00783 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF75 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI000844CC86 |
| EnsemblPlantsGene:Zm00001d048959 | EnsemblPlants:Zm00001d048959_P002 | EnsemblPlants:Zm00001d048959_T002 | SEG:seg | : | : |
Description
small basic membrane intrinsic protein1a small basic membrane intrinsic protein1a
Coordinates
chr4:-:10754425..10760360
Molecular Weight (calculated)
24507.0 Da
IEP (calculated)
8.059
GRAVY (calculated)
0.707
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMGATVRAA AADAVVTFLW VLCASALGAS TAAVTSYLGV QEGAGHYALL VTTSLLSVLL FTFDLLCGAL GGASFNPTDF AASYAAGLDS PSLAAGAVGG
101: ALAISELMPA QYKHTLAGPS LKVDPHTGAL AEGVLTFVIT LTVLWVIVKG PRNVILKTLL LSTSIVSVIL AGAEYTGPSM NPANAFGWAY VNNWHNTWEQ
201: LYVYWICPFI GAMLAGWIFR VVFLPPAPKP KTKKA
101: ALAISELMPA QYKHTLAGPS LKVDPHTGAL AEGVLTFVIT LTVLWVIVKG PRNVILKTLL LSTSIVSVIL AGAEYTGPSM NPANAFGWAY VNNWHNTWEQ
201: LYVYWICPFI GAMLAGWIFR VVFLPPAPKP KTKKA
001: MMGVLKSAIG DMLMTFSWVV LSATFGIQTA AIISAGDFQA ITWAPLVILT SLIFVYVSIF TVIFGSASFN PTGSAAFYVA GVPGDTLFSL AIRLPAQAIG
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA
Arabidopsis Description
SIP1-1SIP1A [Source:UniProtKB/TrEMBL;Acc:A0A178V5Y6]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.