Factsheet for Solyc12g019690.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400048461	Potato	extracellular	92.15	93.31
Solyc10g078490.1.1	Tomato	nucleus	62.81	62.55
VIT_08s0007g07680.t01	Wine grape	extracellular, plasma membrane, vacuole	59.92	60.92
EES19498	Sorghum	plasma membrane	55.79	55.56
TraesCS4A01G180200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	55.37	55.37
TraesCS4B01G137500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	55.37	54.92
Solyc10g078500.1.1	Tomato	extracellular	23.55	54.81
Zm00001d010325_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	54.96	54.73
GSMUA_Achr11P...	Banana	plasma membrane	53.72	54.62
TraesCS4D01G132200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	54.96	54.51
Os01t0182200-02	Rice	endoplasmic reticulum, plasma membrane	52.89	52.03
Zm00001d048959_P002	Maize	endoplasmic reticulum, extracellular, vacuole	50.0	51.49
KRH56152	Soybean	extracellular	48.76	49.37
KRH25362	Soybean	endoplasmic reticulum, extracellular, plasma membrane	48.35	48.95
EES08298	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	49.59	48.78
Solyc01g056720.2.1	Tomato	endoplasmic reticulum, extracellular	28.51	31.94
Zm00001d044543_P001	Maize	plastid	32.23	30.83
Zm00001d032015_P001	Maize	plastid	31.41	30.4
Zm00001d017903_P001	Maize	cytosol	35.12	20.09

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.4	EMBL:AB845633	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0034220	GO:GO:0055085	InterPro:IPR023271	UniProt:K4DDJ2	InterPro:MIP	PFAM:PF00230
PRINTS:PR00783	PANTHER:PTHR19139	PANTHER:PTHR19139:SF75	SUPFAM:SSF81338	EnsemblPlantsGene:Solyc12g019690.1	EnsemblPlants:Solyc12g019690.1.1
TMHMM:TMhelix	UniParc:UPI0001B34C17	SEG:seg	:	:	:

Description

Small basic intrinsic protein 11 [Source:UniProtKB/TrEMBL;Acc:K4DDJ2]

Coordinates

chr12:-:11001676..11005751

Molecular Weight (calculated)

26164.3 Da

IEP (calculated)

7.053

GRAVY (calculated)

0.745

Length

242 amino acids

Sequence
(BLAST)

001: MGVIKAAIAD GLLTFLWVFC SSNIGVSTYF IASYFGIVNE IPSLFITTLI VFVIFLMFDF LGDVLGGAGF NPTGNAAFYA AGLGDDSLVS AAVRCPAQVA
101: GAVAGSLALV ELIPKHYHHM LDGPALKVDV QTGAIAEGVL TFVITFMIFV IVLRGPESVL LKNWLLTMVT LPLVLAGSNF TGPSMNPANA FGWAYLSNTH
201: KTLEHFYVYW ISPFIGAILA AWIFRVLFPP PVEQKPQKQK RN

Best Arabidopsis Sequence Match ( AT5G18290.2 )
(BLAST)

001: MSAVKSALGD MVITFLWVIL SATFGIQTAA IVSAVGFHGI TWAPLVISTL VVFVSISIFT VIGNVLGGAS FNPCGNAAFY TAGVSSDSLF SLAIRSPAQA
101: IGAAGGAITI MEMIPEKYKT RIGGKPSLQF GAHNGAISEV VLSFSVTFLV LLIILRGPRK LLAKTFLLAL ATVSVFVVGS KFTRPFMNPA IAFGWAYIYK
201: SHNTWDHFYV YWISSYTGAI LSAMLFRIIF PAPPLVQKKQ KKA

Arabidopsis Description

SIP1-2Probable aquaporin SIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK43]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.