Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G180200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 98.36 | 99.17 |
| TraesCS4D01G132200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 98.36 | 98.36 |
| EES19498 | Sorghum | plasma membrane | 84.43 | 84.77 |
| Os01t0182200-02 | Rice | endoplasmic reticulum, plasma membrane | 85.25 | 84.55 |
| Zm00001d010325_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 83.61 | 83.95 |
| EES08298 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 77.05 | 76.42 |
| Zm00001d048959_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 73.36 | 76.17 |
| GSMUA_Achr11P... | Banana | plasma membrane | 65.98 | 67.65 |
| VIT_08s0007g07680.t01 | Wine grape | extracellular, plasma membrane, vacuole | 61.89 | 63.45 |
| KRH06755 | Soybean | plasma membrane | 63.11 | 62.1 |
| KRG94774 | Soybean | plasma membrane | 62.7 | 61.69 |
| Solyc10g078490.1.1 | Tomato | nucleus | 60.25 | 60.49 |
| PGSC0003DMT400021557 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 59.43 | 59.67 |
| PGSC0003DMT400048461 | Potato | extracellular | 56.97 | 58.16 |
| KRH08462 | Soybean | extracellular, plasma membrane, vacuole | 57.79 | 57.55 |
| KRH70120 | Soybean | extracellular, plasma membrane, vacuole | 57.38 | 56.68 |
| Solyc12g019690.1.1 | Tomato | extracellular, plasma membrane, vacuole | 54.92 | 55.37 |
| AT3G04090.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 52.46 | 53.33 |
| CDY50883 | Canola | extracellular, plasma membrane | 51.64 | 52.72 |
| Bra031946.1-P | Field mustard | extracellular, plasma membrane | 51.64 | 52.72 |
| CDY42904 | Canola | plasma membrane | 51.23 | 52.3 |
| Bra040150.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 53.69 | 51.57 |
| KRH56152 | Soybean | extracellular | 49.59 | 50.63 |
| CDY66671 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.0 | 50.21 |
| CDY38504 | Canola | endoplasmic reticulum, extracellular, vacuole | 50.0 | 50.21 |
| Bra002151.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 50.0 | 50.21 |
| KRH25362 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 48.77 | 49.79 |
| AT5G18290.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 49.18 | 49.38 |
| Zm00001d032015_P001 | Maize | plastid | 45.9 | 44.8 |
| Zm00001d044543_P001 | Maize | plastid | 45.49 | 43.87 |
| Solyc10g078500.1.1 | Tomato | extracellular | 18.44 | 43.27 |
| Zm00001d017903_P001 | Maize | cytosol | 47.54 | 27.42 |
| TraesCS4B01G178000.2 | Wheat | plasma membrane | 30.74 | 25.17 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.4 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF75 |
| SUPFAM:SSF81338 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4B01G137500 | EnsemblPlants:TraesCS4B01G137500.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr4B:+:181429407..181431182
Molecular Weight (calculated)
25501.4 Da
IEP (calculated)
8.604
GRAVY (calculated)
0.726
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMGTAVREA AADGVVTFLW VLCVSTLGAS TAAVTTYLSL HEGIHYALLV TVSILALLLF AFNLLCDALG GASFNPTGVA AFYAAGLTSP SLFSIALRLP
101: AQAAGAVGGA LAISELMPEQ YKHMLGGPSL KVDPHTGAVA EGVLTFVITF AVLCIIVKGP RNPIVKTAML SVSTVSLVLT GAAYTGPSMN PANAFGWAYV
201: NNLHNTWEQL YVYWICPFIG AILAAWTFRA VFPPPAPKPK TKKA
101: AQAAGAVGGA LAISELMPEQ YKHMLGGPSL KVDPHTGAVA EGVLTFVITF AVLCIIVKGP RNPIVKTAML SVSTVSLVLT GAAYTGPSMN PANAFGWAYV
201: NNLHNTWEQL YVYWICPFIG AILAAWTFRA VFPPPAPKPK TKKA
001: MMGVLKSAIG DMLMTFSWVV LSATFGIQTA AIISAGDFQA ITWAPLVILT SLIFVYVSIF TVIFGSASFN PTGSAAFYVA GVPGDTLFSL AIRLPAQAIG
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA
Arabidopsis Description
SIP1-1SIP1A [Source:UniProtKB/TrEMBL;Acc:A0A178V5Y6]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.