Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38504 | Canola | endoplasmic reticulum, extracellular, vacuole | 99.18 | 99.18 |
| AT5G18290.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 84.36 | 84.36 |
| CDY50883 | Canola | extracellular, plasma membrane | 67.49 | 68.62 |
| CDY42904 | Canola | plasma membrane | 66.67 | 67.78 |
| KRG94774 | Soybean | plasma membrane | 55.97 | 54.84 |
| KRH06755 | Soybean | plasma membrane | 55.14 | 54.03 |
| KRH08462 | Soybean | extracellular, plasma membrane, vacuole | 51.03 | 50.61 |
| TraesCS4A01G180200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 50.21 | 50.41 |
| KRH70120 | Soybean | extracellular, plasma membrane, vacuole | 51.03 | 50.2 |
| TraesCS4D01G132200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 50.21 | 50.0 |
| TraesCS4B01G137500.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 50.21 | 50.0 |
| EES19498 | Sorghum | plasma membrane | 48.97 | 48.97 |
| Os01t0182200-02 | Rice | endoplasmic reticulum, plasma membrane | 48.97 | 48.37 |
| GSMUA_Achr11P... | Banana | plasma membrane | 46.91 | 47.9 |
| Zm00001d010325_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 47.74 | 47.74 |
| Zm00001d048959_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 42.8 | 44.26 |
| EES08298 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 44.03 | 43.5 |
| CDX72093 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 10.7 | 28.57 |
| CDY51268 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 26.34 | 26.89 |
| CDX76020 | Canola | extracellular, mitochondrion | 10.7 | 26.53 |
| CDX67665 | Canola | plasma membrane | 25.93 | 26.47 |
| CDY47387 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 25.51 | 26.16 |
| CDY08683 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 25.51 | 26.16 |
| Zm00001d044543_P001 | Maize | plastid | 26.75 | 25.69 |
| Zm00001d032015_P001 | Maize | plastid | 25.93 | 25.2 |
| CDY27177 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 22.63 | 23.5 |
| CDX72092 | Canola | extracellular | 7.41 | 18.0 |
| Zm00001d017903_P001 | Maize | cytosol | 28.81 | 16.55 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.4 | GO:A0A078JLI6 | UniProt:A0A078JLI6 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EnsemblPlants:CDY66671 | ProteinID:CDY66671 | ProteinID:CDY66671.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00055542001 | InterPro:IPR023271 | InterPro:MIP | PFAM:PF00230 | PRINTS:PR00783 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF75 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI0004EE81FA | SEG:seg | : |
Description
BnaC09g54320DBnaC09g54320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLI6]
Coordinates
chrLK035399:+:13347..15171
Molecular Weight (calculated)
26216.4 Da
IEP (calculated)
10.688
GRAVY (calculated)
0.736
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MNAVRSALGD MVITFFWVIL SATFGLQTAA IVSAAGFHGI TWAPPLITTV VVFFSISVFT VIGNFLGGAS FNPCGNAAFY TAGVSTDSLF SLAIRSPAQA
101: LGAAAGAITI MEMIPEKYKT MIGGRPSFRV DAHSGAISEV ILSFCVTFLV LLIILRGPRK LLAKTFLLAI ATVSVFIAGS TFTRPFMNPA IAFGWAYIHK
201: SHNTWNHFYV YWFSSFTGAI LSAILFRSLF PPPLPVQKKQ KKA
101: LGAAAGAITI MEMIPEKYKT MIGGRPSFRV DAHSGAISEV ILSFCVTFLV LLIILRGPRK LLAKTFLLAI ATVSVFIAGS TFTRPFMNPA IAFGWAYIHK
201: SHNTWNHFYV YWFSSFTGAI LSAILFRSLF PPPLPVQKKQ KKA
001: MSAVKSALGD MVITFLWVIL SATFGIQTAA IVSAVGFHGI TWAPLVISTL VVFVSISIFT VIGNVLGGAS FNPCGNAAFY TAGVSSDSLF SLAIRSPAQA
101: IGAAGGAITI MEMIPEKYKT RIGGKPSLQF GAHNGAISEV VLSFSVTFLV LLIILRGPRK LLAKTFLLAL ATVSVFVVGS KFTRPFMNPA IAFGWAYIYK
201: SHNTWDHFYV YWISSYTGAI LSAMLFRIIF PAPPLVQKKQ KKA
101: IGAAGGAITI MEMIPEKYKT RIGGKPSLQF GAHNGAISEV VLSFSVTFLV LLIILRGPRK LLAKTFLLAL ATVSVFVVGS KFTRPFMNPA IAFGWAYIYK
201: SHNTWDHFYV YWISSYTGAI LSAMLFRIIF PAPPLVQKKQ KKA
Arabidopsis Description
SIP1-2Probable aquaporin SIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK43]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.