CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 5
golgi 4
plasma membrane 7
endoplasmic reticulum 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003257.1-P	Field mustard	plasma membrane	100.0	100.0
CDY51268	Canola	endoplasmic reticulum, extracellular, plasma membrane	96.64	96.64
CDY08683	Canola	endoplasmic reticulum, extracellular, plasma membrane	89.5	89.87
CDY47387	Canola	endoplasmic reticulum, extracellular, plasma membrane	89.5	89.87
CDX72092	Canola	extracellular	36.55	87.0
CDX76020	Canola	extracellular, mitochondrion	34.87	84.69
AT3G56950.2	Thale cress	plasma membrane	86.97	79.62
CDY27177	Canola	endoplasmic reticulum, extracellular, plasma membrane	78.15	79.49
CDX72093	Canola	endoplasmic reticulum, plasma membrane, vacuole	28.15	73.63
VIT_08s0040g00400.t01	Wine grape	endoplasmic reticulum	59.24	58.51
KRH66640	Soybean	extracellular	56.3	58.26
Solyc01g056720.2.1	Tomato	endoplasmic reticulum, extracellular	52.1	57.41
KRG95000	Soybean	extracellular	56.72	57.2
GSMUA_Achr5P27600_001	Banana	extracellular	51.26	51.26
Os03t0320000-01	Rice	endoplasmic reticulum, plasma membrane	49.16	46.8
Zm00001d028951_P001	Maize	plasma membrane	47.9	45.78
EER92349	Sorghum	endoplasmic reticulum, plasma membrane	46.64	44.58
TraesCS4D01G179600.1	Wheat	plasma membrane	46.64	44.58
TraesCS4A01G126900.1	Wheat	plasma membrane	47.06	44.27
GSMUA_Achr5P21450_001	Banana	plasma membrane	44.12	40.23
TraesCS4B01G178000.2	Wheat	plasma membrane	46.64	37.25
CDY50883	Canola	extracellular, plasma membrane	26.05	25.94
CDY66671	Canola	endoplasmic reticulum, extracellular, vacuole	26.47	25.93
CDY38504	Canola	endoplasmic reticulum, extracellular, vacuole	26.47	25.93
CDY42904	Canola	plasma membrane	25.63	25.52

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.4	GO:A0A078BSS7	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlants:CDX67665
ProteinID:CDX67665	ProteinID:CDX67665.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00098835001	InterPro:IPR023271
InterPro:MIP	PFAM:PF00230	PRINTS:PR00783	PANTHER:PTHR19139	PANTHER:PTHR19139:SF128	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI000254153B	SEG:seg	:	:	:

Description

BnaA07g17050D

Coordinates

chrLK031787:-:1629173..1630661

Molecular Weight (calculated)

26029.6 Da

IEP (calculated)

10.197

GRAVY (calculated)

0.671

Length

238 amino acids

Sequence
(BLAST)

001: MGRISLVVSD LVLSFMWIWA GVLVNVLVHG VLGFSRKDTT GDIVRYLFSV ISMFVFAFLQ KLTKGGLYNP LTALASGVSG GFSSFIFSVV VRIPVEVLGS
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVM LSLGLTRKIP GSFFMKTWIG SIAKLTLHVL GADLTGGCMN PAAVMGWAYA RGEHITQEHL
201: LVYWLGPVKA TLLAVWFFNV VFKPLTEEQQ EKPKAKSE

Best Arabidopsis Sequence Match ( AT3G56950.2 )
(BLAST)

001: MGRIGLVVTD LVLSFMWIWA GVLVNILVHG VLGFSRTDPS GEIVRYLFSI ISMFIFAYLQ QATKGGLYNP LTALAAGVSG GFSSFIFSVF VRIPVEVIGS
101: ILAVKHIIHV FPEIGKGPKL NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN PAAVMGWAYA RGEHITKEHL
201: LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSEFCN VFFFYVANST VSTSSIKSEI

Arabidopsis Description

SIP2;1Small and basic intrinsic protein 21 [Source:UniProtKB/TrEMBL;Acc:F4J0V0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.