Factsheet for Solyc10g078500.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021557	Potato	endoplasmic reticulum, plasma membrane, vacuole	89.42	38.27
Solyc10g078490.1.1	Tomato	nucleus	62.5	26.75
VIT_08s0007g07680.t01	Wine grape	extracellular, plasma membrane, vacuole	54.81	23.95
Solyc12g019690.1.1	Tomato	extracellular, plasma membrane, vacuole	54.81	23.55
GSMUA_Achr11P...	Banana	plasma membrane	46.15	20.17
EES19498	Sorghum	plasma membrane	45.19	19.34
Zm00001d010325_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	44.23	18.93
TraesCS4B01G137500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	43.27	18.44
TraesCS4D01G132200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	43.27	18.44
TraesCS4A01G180200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	42.31	18.18
Os01t0182200-02	Rice	endoplasmic reticulum, plasma membrane	41.35	17.48
EES08298	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	40.38	17.07
KRH56152	Soybean	extracellular	36.54	15.9
KRH25362	Soybean	endoplasmic reticulum, extracellular, plasma membrane	36.54	15.9
Zm00001d048959_P002	Maize	endoplasmic reticulum, extracellular, vacuole	31.73	14.04
Solyc01g056720.2.1	Tomato	endoplasmic reticulum, extracellular	24.04	11.57
Zm00001d044543_P001	Maize	plastid	27.88	11.46
Zm00001d032015_P001	Maize	plastid	26.92	11.2
Zm00001d017903_P001	Maize	cytosol	29.81	7.33

Protein Annotations

Gene3D:1.20.1080.10	MapMan:35.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0015250	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	InterPro:IPR023271
UniProt:K4D292	PANTHER:PTHR19139	PANTHER:PTHR19139:SF75	SUPFAM:SSF81338	EnsemblPlantsGene:Solyc10g078500.1	EnsemblPlants:Solyc10g078500.1.1
TMHMM:TMhelix	UniParc:UPI000276A24D	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:60302536..60303877

Molecular Weight (calculated)

10812.7 Da

IEP (calculated)

9.172

GRAVY (calculated)

1.478

Length

104 amino acids

Sequence
(BLAST)

001: MKMGVVKAVV ADFVMTFIAI FCVSTIGVLT YIIRSAFGIA PGLASLSITI LIVFLLFLML SVIAEALGGA AFNPAATAAF YAAGVGKDSL FSVAARFPAQ
101: YLLL

Best Arabidopsis Sequence Match ( AT5G18290.2 )
(BLAST)

001: MSAVKSALGD MVITFLWVIL SATFGIQTAA IVSAVGFHGI TWAPLVISTL VVFVSISIFT VIGNVLGGAS FNPCGNAAFY TAGVSSDSLF SLAIRSPAQA
101: IGAAGGAITI MEMIPEKYKT RIGGKPSLQF GAHNGAISEV VLSFSVTFLV LLIILRGPRK LLAKTFLLAL ATVSVFVVGS KFTRPFMNPA IAFGWAYIYK
201: SHNTWDHFYV YWISSYTGAI LSAMLFRIIF PAPPLVQKKQ KKA

Arabidopsis Description

SIP1-2Probable aquaporin SIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK43]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.