CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 1
extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane, vacuole
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25362	Soybean	endoplasmic reticulum, extracellular, plasma membrane	92.05	92.05
VIT_08s0007g07680.t01	Wine grape	extracellular, plasma membrane, vacuole	55.23	55.46
KRG94774	Soybean	plasma membrane	53.56	51.61
KRH06755	Soybean	plasma membrane	53.14	51.21
TraesCS4A01G180200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	51.05	50.41
PGSC0003DMT400048461	Potato	extracellular	50.21	50.21
Solyc10g078490.1.1	Tomato	nucleus	50.63	49.79
TraesCS4B01G137500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	50.63	49.59
GSMUA_Achr11P...	Banana	plasma membrane	49.37	49.58
Zm00001d010325_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	50.21	49.38
TraesCS4D01G132200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	50.21	49.18
KRH08462	Soybean	extracellular, plasma membrane, vacuole	50.21	48.98
EES19498	Sorghum	plasma membrane	49.79	48.97
Solyc12g019690.1.1	Tomato	extracellular, plasma membrane, vacuole	49.37	48.76
KRH70120	Soybean	extracellular, plasma membrane, vacuole	50.21	48.58
Os01t0182200-02	Rice	endoplasmic reticulum, plasma membrane	48.54	47.15
PGSC0003DMT400021557	Potato	endoplasmic reticulum, plasma membrane, vacuole	47.7	46.91
Zm00001d048959_P002	Maize	endoplasmic reticulum, extracellular, vacuole	45.61	46.38
EES08298	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	47.28	45.94
Solyc10g078500.1.1	Tomato	extracellular	15.9	36.54
KRH66640	Soybean	extracellular	32.64	33.91
KRG95000	Soybean	extracellular	31.8	32.2
Zm00001d044543_P001	Maize	plastid	28.03	26.48
Zm00001d032015_P001	Maize	plastid	27.62	26.4
Zm00001d017903_P001	Maize	cytosol	30.54	17.26

Protein Annotations

Gene3D:1.20.1080.10	EntrezGene:100797126	MapMan:24.3.1.4	EMBL:ACUP02004101	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
EnsemblPlantsGene:GLYMA_06G307000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250	GO:GO:0015267
GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	UniProt:I1KFE8	InterPro:IPR023271
EnsemblPlants:KRH56152	ProteinID:KRH56152	ProteinID:KRH56152.1	InterPro:MIP	PFAM:PF00230	PRINTS:PR00783
PANTHER:PTHR19139	PANTHER:PTHR19139:SF75	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI000233A779	:

Description

hypothetical protein

Coordinates

chr6:-:49587244..49588444

Molecular Weight (calculated)

25869.2 Da

IEP (calculated)

10.421

GRAVY (calculated)

0.641

Length

239 amino acids

Sequence
(BLAST)

001: MGLIKAAIGD GVLTSMWVFI ISTLRIVTTE VALFLGLQPL SLAGLIISTI LNSFYVLTIS FIGRILGGAN FNPSTSLSFY TAGLRPDSSL SSMAVRFPVQ
101: AYGGAVGVKT LLLVMPSKYN DMLKGPFLKV DLHSGAVAEG VLTFTHNMAI FFVMFKGPRN PFVKVYLLSV TTAVLAILGG GFTGPSMNPA NAFGWAFVNN
201: KHNTWEQFYV YWICPFIGAS SAALIFRSMF MPPIKQKKA

Best Arabidopsis Sequence Match ( AT3G04090.1 )
(BLAST)

001: MMGVLKSAIG DMLMTFSWVV LSATFGIQTA AIISAGDFQA ITWAPLVILT SLIFVYVSIF TVIFGSASFN PTGSAAFYVA GVPGDTLFSL AIRLPAQAIG
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA

Arabidopsis Description

SIP1-1SIP1A [Source:UniProtKB/TrEMBL;Acc:A0A178V5Y6]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.