Factsheet for Bra040150.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 1
plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031946.1-P	Field mustard	extracellular, plasma membrane	87.4	92.89
AT3G04090.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	82.68	87.5
Bra002151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	63.39	66.26
KRH06755	Soybean	plasma membrane	56.69	58.06
KRG94774	Soybean	plasma membrane	56.69	58.06
KRH08462	Soybean	extracellular, plasma membrane, vacuole	52.36	54.29
TraesCS4A01G180200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	51.57	54.13
TraesCS4D01G132200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	51.97	54.1
EES19498	Sorghum	plasma membrane	51.57	53.91
TraesCS4B01G137500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	51.57	53.69
Zm00001d010325_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	51.18	53.5
Os01t0182200-02	Rice	endoplasmic reticulum, plasma membrane	51.18	52.85
KRH70120	Soybean	extracellular, plasma membrane, vacuole	51.18	52.63
GSMUA_Achr11P...	Banana	plasma membrane	49.21	52.52
Zm00001d048959_P002	Maize	endoplasmic reticulum, extracellular, vacuole	45.67	49.36
EES08298	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	47.24	48.78
Zm00001d044543_P001	Maize	plastid	28.74	28.85
Zm00001d032015_P001	Maize	plastid	28.35	28.8
Bra014661.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	25.59	27.43
Bra007285.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	24.41	26.5
Bra003257.1-P	Field mustard	plasma membrane	24.8	26.47
Zm00001d017903_P001	Maize	cytosol	31.89	19.15

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.4	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra040150	EnsemblPlants:Bra040150.1
EnsemblPlants:Bra040150.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4FGC2
InterPro:MIP	PFAM:PF00230	PRINTS:PR00783	PANTHER:PTHR19139	PANTHER:PTHR19139:SF75	SUPFAM:SSF81338
TMHMM:TMhelix	UniParc:UPI0002545084	SEG:seg	:	:	:

Description

AT3G04090 (E=1e-093) SIP1;1, SIP1A | SIP1A (SMALL AND BASIC INTRINSIC PROTEIN 1A); water channel

Coordinates

chrA01:+:28493755..28495590

Molecular Weight (calculated)

27239.7 Da

IEP (calculated)

10.524

GRAVY (calculated)

0.495

Length

254 amino acids

Sequence
(BLAST)

001: MGVVKSATGD MLMTFSWVVL SATFGLQTTE IISAAGLHGI TWAPLAITTF LIFVYVSIFT VVFGSASFNP TGNAAFYAAG IPGDTLFTLA IRLPAQAAGA
101: AGGALAIMEF IPEKYKHMIS GPSLLVDVHT GAIAETILSF GITFAVLLII LKGPRRLLAK TLLLSLATIC FVVAGSKYTG PAMNPAIAFG WAYMTSSHNT
201: WDHFYVYWIS SFVGALSAAL IFRTIFPPSP SPPRPQKKQK KQKKQKKAEK QKKA

Best Arabidopsis Sequence Match ( AT3G04090.1 )
(BLAST)

001: MMGVLKSAIG DMLMTFSWVV LSATFGIQTA AIISAGDFQA ITWAPLVILT SLIFVYVSIF TVIFGSASFN PTGSAAFYVA GVPGDTLFSL AIRLPAQAIG
101: AAGGALAIME FIPEKYKHMI GGPSLQVDVH TGAIAETILS FGITFAVLLI ILRGPRRLLA KTFLLALATI SFVVAGSKYT GPAMNPAIAF GWAYMYSSHN
201: TWDHIYVYWI SSFVGALSAA LLFRSIFPPP RPQKKKQKKA

Arabidopsis Description

SIP1-1SIP1A [Source:UniProtKB/TrEMBL;Acc:A0A178V5Y6]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.