Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41806 | Canola | endoplasmic reticulum, extracellular, vacuole | 78.33 | 78.33 |
| CDY66048 | Canola | endoplasmic reticulum, extracellular, vacuole | 78.33 | 78.33 |
| CDY20717 | Canola | endoplasmic reticulum, extracellular, vacuole | 76.67 | 76.67 |
| CDY32859 | Canola | extracellular | 73.33 | 73.33 |
| Bra002808.1-P | Field mustard | extracellular | 71.67 | 71.67 |
| CDY32770 | Canola | extracellular | 71.67 | 71.67 |
| AT4G26320.1 | Thale cress | extracellular | 70.0 | 71.19 |
| AT3G13520.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 60.0 | 60.0 |
| PGSC0003DMT400021604 | Potato | endoplasmic reticulum, extracellular, vacuole | 55.0 | 55.0 |
| VIT_06s0004g00440.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 53.33 | 54.24 |
| AT1G55330.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 51.67 | 53.45 |
| Solyc10g078580.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 51.67 | 51.67 |
Protein Annotations
| MapMan:35.2 | EntrezGene:835755 | UniProt:A0A178UBA7 | ProteinID:AED96779.1 | EMBL:AF195895 | Symbol:AGP14 |
| EMBL:AK117330 | ArrayExpress:AT5G56540 | EnsemblPlantsGene:AT5G56540 | RefSeq:AT5G56540 | TAIR:AT5G56540 | RefSeq:AT5G56540-TAIR-G |
| EnsemblPlants:AT5G56540.1 | TAIR:AT5G56540.1 | Unigene:At.24267 | ProteinID:BAA97180.1 | EMBL:BT004644 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016049 |
| GO:GO:0030154 | GO:GO:0031225 | GO:GO:0040007 | GO:GO:0048767 | RefSeq:NP_200465.1 | ProteinID:OAO90494.1 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR34114 | PANTHER:PTHR34114:SF2 | UniProt:Q9LVC0 | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI000000C400 | SEG:seg | : | : | : | : |
Description
AGP14Arabinogalactan peptide 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVC0]
Coordinates
chr5:+:22893151..22893651
Molecular Weight (calculated)
6362.9 Da
IEP (calculated)
5.519
GRAVY (calculated)
1.128
Length
60 amino acids
Sequence
(BLAST)
(BLAST)
1: MEAMKMKLYV VVLVAVIAFS TVHQTVAAVD APAPSPTSDA SSFIPTFFAS VAVMAFGFFF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.