Factsheet for Bra000206.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35438	Canola	mitochondrion, nucleus, vacuole	99.11	99.41
Bra000205.1-P	Field mustard	extracellular	65.98	66.97
AT2G40815.1	Thale cress	extracellular, plasma membrane, plastid	70.12	64.58
Solyc03g095300.2.1	Tomato	mitochondrion	22.78	53.47
PGSC0003DMT400013484	Potato	cytosol, golgi, mitochondrion, nucleus	43.2	45.77
VIT_13s0067g00140.t01	Wine grape	extracellular, mitochondrion, nucleus, plasma membrane	43.49	45.51
KRH16945	Soybean	mitochondrion	40.53	43.77
KRH72560	Soybean	mitochondrion	41.72	43.52
TraesCS3A01G341500.1	Wheat	mitochondrion	35.5	38.46
TraesCS3B01G373600.1	Wheat	mitochondrion	35.5	38.46
TraesCS3D01G335200.1	Wheat	mitochondrion	35.21	38.14
GSMUA_Achr7P21910_001	Banana	mitochondrion	35.5	37.5
KRH64243	Soybean	extracellular, plasma membrane	36.39	36.94
KRH53687	Soybean	plasma membrane	36.39	36.94
EES01658	Sorghum	mitochondrion	33.43	36.22
Os01t0818100-00	Rice	mitochondrion	32.25	35.16
Zm00001d043082_P001	Maize	nucleus, peroxisome, plastid	31.95	34.29

Protein Annotations

EnsemblPlants:Bra000206.1	EnsemblPlants:Bra000206.1-P	EnsemblPlantsGene:Bra000206	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF15	PFAM:PF00168	SEG:seg
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00025402E4	UniProt:M4C7M8	MapMan:35.2	:

Description

AT2G40815 (E=2e-081) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008).

Coordinates

chrA03:-:9875145..9876358

Molecular Weight (calculated)

36308.6 Da

IEP (calculated)

9.085

GRAVY (calculated)

-0.459

Length

338 amino acids

Sequence
(BLAST)

001: MGKTHIEICL ISARGLRVGT GFGSSLLKHQ WYAVGWIDPE SKYCTTIDAS RSDNPLWRTK FATLLDDDDA SKIQALHVEV YSREPIFLRK KLHGSATVSL
101: KEFLVKYKKQ SSVVEETGSY QLRKVNSSKA QGFVDVSIRV SAERQDFGGF TGDFGGVMLS NNSGYNNTSG QNYMSGSSQH PFASLNQPNN PNPFSVPPDK
201: HHSPMPNPLT NNASPQMQQP YYPPPPPMQQ PYYPPPPPST STAGYMPSYM PRSENAVNIP SSSSGGAGRG YARPGPGGSA GLGAGAIVGA AAAFYGRDYL
301: SGGFDLPTSL PLPNFSIPNI SLPNVSIPNG SISIDPPF

Best Arabidopsis Sequence Match ( AT2G40815.2 )
(BLAST)

001: MGKILVEICM ISARGLRVGI GIGSSLLKHQ WYAVGWLDPE DKYCTTIDAS RADNPVWRTK FATLLDDSTI QDSKLALQVE VYSREPLFLR KRLHGSATVS
101: LKEFLTKYKQ QQSSSKAVIE ETGSYQLRKT NSSKPQGFVD VSIRISAERE DFGGFTGDFG GVMLSNNSDY NTSGQDYMAG SSQYPFAPMD QSNPFSVPPS
201: YNHHSSMPNP PMTNTNPQMQ QPYYPPPMQP PPPPMNSGYM PTYIPNSENV TNIPSSSSSG GVPGGAGRGY ARTGPGFAVG VGAGAVVGAG AALYGSEFMS
301: GIDLPSSLPH PSVPISIDPP F

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4IIZ8]
SUBAcon: [plasma membrane,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.