Factsheet for Solyc03g095300.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
cytosol 2
peroxisome 1
vacuole 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013484	Potato	cytosol, golgi, mitochondrion, nucleus	83.33	37.62
CDY22480	Canola	vacuole	50.0	31.44
VIT_13s0067g00140.t01	Wine grape	extracellular, mitochondrion, nucleus, plasma membrane	65.28	29.1
GSMUA_Achr7P21910_001	Banana	mitochondrion	54.86	24.69
CDY22481	Canola	cytosol, extracellular, nucleus	38.19	24.55
TraesCS3B01G373600.1	Wheat	mitochondrion	52.78	24.36
KRH16945	Soybean	mitochondrion	52.78	24.28
KRH72560	Soybean	mitochondrion	54.17	24.07
TraesCS3A01G341500.1	Wheat	mitochondrion	52.08	24.04
KRH64243	Soybean	extracellular, plasma membrane	55.56	24.02
TraesCS3D01G335200.1	Wheat	mitochondrion	51.39	23.72
KRH53687	Soybean	plasma membrane	53.47	23.12
CDY35438	Canola	mitochondrion, nucleus, vacuole	53.47	22.85
Bra000206.1-P	Field mustard	cytosol, nucleus, vacuole	53.47	22.78
CDY22482	Canola	mitochondrion	53.47	22.45
EES01658	Sorghum	mitochondrion	47.92	22.12
Os01t0818100-00	Rice	mitochondrion	47.22	21.94
CDY35439	Canola	extracellular, vacuole	50.69	21.92
Zm00001d043082_P001	Maize	nucleus, peroxisome, plastid	47.92	21.9
AT2G40815.1	Thale cress	extracellular, plasma membrane, plastid	54.17	21.25
Bra000205.1-P	Field mustard	extracellular	48.61	21.02

Protein Annotations

EnsemblPlants:Solyc03g095300.2.1	EnsemblPlantsGene:Solyc03g095300.2	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF15	PFAM:PF00168	SMART:SM00239	SUPFAM:SSF49562
UniParc:UPI0002767838	UniProt:K4BIV4	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3:-:56323385..56324528

Molecular Weight (calculated)

16551.2 Da

IEP (calculated)

10.435

GRAVY (calculated)

-0.301

Length

144 amino acids

Sequence
(BLAST)

001: MAKIWIEICM ISARGLRRTS ALWKLQWYAV GWIDPNNKYC SKIDSSGNAN PVWKTKFSML VDTSLQDLAL NVEVYSREPI FLREKLMGTA TVLLKEFLDK
101: YNKNTEVSKP IEEVGKFRRR GKNLVHNQVK RRDLSLGITA VAST

Best Arabidopsis Sequence Match ( AT2G40815.1 )
(BLAST)

001: MGKILVEICM ISARGLRVGI GIGSSLLKHQ WYAVGWLDPE DKYCTTIDAS RADNPVWRTK FATLLDDSTI QDSKLALQVE VYSREPLFLR KRLHGSATVS
101: LKEFLTKYKQ QQSSSKAVIE ETGSYQLRKT NSSKPQGFVD VSIRISAERE DFGGFTGDFG GVMLSNNSDY NTSGQDYMAG SSQYPFAPMD QSNPFSVPPS
201: YNHHSSMPNP PMTNTNPQMQ QPYYPPPMQP PPPPMNSGYM PTYIPKSVND SSMPNPPMNN TNPQMQQPYY PPPMQPAPPP MNSGYMPTYI PNSENVTNIP
301: SSSSSGGVPG GAGRGYARTG PGFAVGVGAG AVVGAGAALY GSEFMSGIDL PSSLPHPSVP ISIDPPF

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4IIZ8]
SUBAcon: [plasma membrane,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.