CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 2
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35439	Canola	extracellular, vacuole	85.59	58.86
CDY22481	Canola	cytosol, extracellular, nucleus	49.78	50.89
Solyc03g095300.2.1	Tomato	mitochondrion	31.44	50.0
CDY35438	Canola	mitochondrion, nucleus, vacuole	72.49	49.26
CDY22482	Canola	mitochondrion	72.49	48.4
AT2G40815.1	Thale cress	extracellular, plasma membrane, plastid	68.12	42.51
VIT_13s0067g00140.t01	Wine grape	extracellular, mitochondrion, nucleus, plasma membrane	49.78	35.29
PGSC0003DMT400013484	Potato	cytosol, golgi, mitochondrion, nucleus	48.03	34.48
KRH16945	Soybean	mitochondrion	46.29	33.87
KRH72560	Soybean	mitochondrion	45.85	32.41
GSMUA_Achr7P21910_001	Banana	mitochondrion	44.1	31.56
TraesCS3B01G373600.1	Wheat	mitochondrion	41.48	30.45
TraesCS3D01G335200.1	Wheat	mitochondrion	41.05	30.13
TraesCS3A01G341500.1	Wheat	mitochondrion	41.05	30.13
KRH53687	Soybean	plasma membrane	42.79	29.43
EES01658	Sorghum	mitochondrion	39.74	29.17
KRH64243	Soybean	extracellular, plasma membrane	42.36	29.13
Os01t0818100-00	Rice	mitochondrion	38.43	28.39
Zm00001d043082_P001	Maize	nucleus, peroxisome, plastid	38.43	27.94

Protein Annotations

EnsemblPlants:CDY22480	EnsemblPlantsGene:GSBRNA2T00019040001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF15	PFAM:PF00168	ProteinID:CDY22480	ProteinID:CDY22480.1
SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0004EEC227	UniProt:A0A078G7L6	MapMan:35.2

Description

BnaC03g22900DBnaC03g22900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7L6]

Coordinates

chrLK032132:-:101032..102301

Molecular Weight (calculated)

25162.5 Da

IEP (calculated)

8.617

GRAVY (calculated)

-0.494

Length

229 amino acids

Sequence
(BLAST)

001: MGKILIEICL ISARQLLVGS GFGSSLLKHQ WFAVGWIDPK DKYCTTIDDS RSENPLWRTK FITSLHDDDD SKIHALNVEV YSREPIFLTK KLHGSATVPL
101: KEFLAKYKNQ SSSSSVVEET RSYQLRKTNS SKPQGFVDVS IRISAERQDF GGFTGDFRGV MLSNNSGYMV GYMPRSENAV NIPSSSSSEG AGRGDARTGP
201: GLGAGAASYG RDYMSGAESD QKFSEPYTK

Best Arabidopsis Sequence Match ( AT2G40815.1 )
(BLAST)

001: MGKILVEICM ISARGLRVGI GIGSSLLKHQ WYAVGWLDPE DKYCTTIDAS RADNPVWRTK FATLLDDSTI QDSKLALQVE VYSREPLFLR KRLHGSATVS
101: LKEFLTKYKQ QQSSSKAVIE ETGSYQLRKT NSSKPQGFVD VSIRISAERE DFGGFTGDFG GVMLSNNSDY NTSGQDYMAG SSQYPFAPMD QSNPFSVPPS
201: YNHHSSMPNP PMTNTNPQMQ QPYYPPPMQP PPPPMNSGYM PTYIPKSVND SSMPNPPMNN TNPQMQQPYY PPPMQPAPPP MNSGYMPTYI PNSENVTNIP
301: SSSSSGGVPG GAGRGYARTG PGFAVGVGAG AVVGAGAALY GSEFMSGIDL PSSLPHPSVP ISIDPPF

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4IIZ8]
SUBAcon: [plasma membrane,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.