Factsheet for Zm00001d043082_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

mitochondrion 2
plastid 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01658	Sorghum	mitochondrion	90.79	91.67
Os01t0818100-00	Rice	mitochondrion	69.21	70.32
TraesCS3A01G341500.1	Wheat	mitochondrion	69.21	69.87
TraesCS3D01G335200.1	Wheat	mitochondrion	68.89	69.55
TraesCS3B01G373600.1	Wheat	mitochondrion	68.89	69.55
Solyc03g095300.2.1	Tomato	mitochondrion	21.9	47.92
GSMUA_Achr7P21910_001	Banana	mitochondrion	46.03	45.31
VIT_13s0067g00140.t01	Wine grape	extracellular, mitochondrion, nucleus, plasma membrane	43.17	42.11
PGSC0003DMT400013484	Potato	cytosol, golgi, mitochondrion, nucleus	39.37	38.87
CDY22480	Canola	vacuole	27.94	38.43
KRH16945	Soybean	mitochondrion	36.83	37.06
KRH72560	Soybean	mitochondrion	37.78	36.73
KRH64243	Soybean	extracellular, plasma membrane	35.56	33.63
KRH53687	Soybean	plasma membrane	35.24	33.33
CDY22481	Canola	cytosol, extracellular, nucleus	22.86	32.14
CDY35438	Canola	mitochondrion, nucleus, vacuole	34.29	32.05
Bra000206.1-P	Field mustard	cytosol, nucleus, vacuole	34.29	31.95
CDY22482	Canola	mitochondrion	34.29	31.49
AT2G40815.1	Thale cress	extracellular, plasma membrane, plastid	34.29	29.43
CDY35439	Canola	extracellular, vacuole	30.48	28.83
Bra000205.1-P	Field mustard	extracellular	29.52	27.93

Protein Annotations

EMBL:BT061752	EnsemblPlants:Zm00001d043082_P001	EnsemblPlants:Zm00001d043082_T001	EnsemblPlantsGene:Zm00001d043082	EntrezGene:100381609	Gene3D:2.60.40.150
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF15
PFAM:PF00168	ProteinID:ONM36869.1	SEG:seg	SUPFAM:SSF49562	UniParc:UPI0001948964	UniProt:C0HHE6
MapMan:35.2	:	:	:	:	:

Description

Calcium-dependent lipid-binding (CaLB domain) family protein

Coordinates

chr3:-:188683547..188685059

Molecular Weight (calculated)

34296.4 Da

IEP (calculated)

8.098

GRAVY (calculated)

-0.503

Length

315 amino acids

Sequence
(BLAST)

001: MQMAKTSVEF CVISARGLGR GSSLLKPQWF SVAWVDPNSK YCTKVDASGS SDPSWGMKFS VSVDEHGLSN LQQMVLTVEV YRREPIFLRE HLQGAAVVQM
101: KEYFDKFQHG GEQPGVVEET ASFQLRRKKS DKAHGFVDIS ICIYKEKDVH TQFSGSHDGP KHPNQVGITL AIEDGPVYNY PPLSSSHYRD HSKGDGRYSN
201: TMPKSPTTRP DPSPSGSNGY SYQPPLIPQT LPPPTSNPSY FSPPYPTRGQ VPQSYINMPP RRFAGQNGSS NLGMGLGAGA LAAGTLIFGE NLLPGPNFIA
301: GHDGVSLTLS SDAPF

Best Arabidopsis Sequence Match ( AT2G40815.2 )
(BLAST)

001: MGKILVEICM ISARGLRVGI GIGSSLLKHQ WYAVGWLDPE DKYCTTIDAS RADNPVWRTK FATLLDDSTI QDSKLALQVE VYSREPLFLR KRLHGSATVS
101: LKEFLTKYKQ QQSSSKAVIE ETGSYQLRKT NSSKPQGFVD VSIRISAERE DFGGFTGDFG GVMLSNNSDY NTSGQDYMAG SSQYPFAPMD QSNPFSVPPS
201: YNHHSSMPNP PMTNTNPQMQ QPYYPPPMQP PPPPMNSGYM PTYIPNSENV TNIPSSSSSG GVPGGAGRGY ARTGPGFAVG VGAGAVVGAG AALYGSEFMS
301: GIDLPSSLPH PSVPISIDPP F

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4IIZ8]
SUBAcon: [plasma membrane,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.