CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 2
extracellular 3
vacuole 3
cytosol 1
endoplasmic reticulum 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	cytosol, nucleus, plastid, vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64243	Soybean	extracellular, plasma membrane	89.49	89.49
KRH16945	Soybean	mitochondrion	52.85	56.23
VIT_13s0067g00140.t01	Wine grape	extracellular, mitochondrion, nucleus, plasma membrane	53.15	54.8
KRH72560	Soybean	mitochondrion	53.15	54.63
Solyc03g095300.2.1	Tomato	mitochondrion	23.12	53.47
PGSC0003DMT400013484	Potato	cytosol, golgi, mitochondrion, nucleus	51.05	53.29
GSMUA_Achr7P21910_001	Banana	mitochondrion	41.14	42.81
CDY22480	Canola	vacuole	29.43	42.79
TraesCS3A01G341500.1	Wheat	mitochondrion	35.74	38.14
TraesCS3B01G373600.1	Wheat	mitochondrion	35.74	38.14
TraesCS3D01G335200.1	Wheat	mitochondrion	35.14	37.5
EES01658	Sorghum	mitochondrion	34.23	36.54
CDY35438	Canola	mitochondrion, nucleus, vacuole	36.94	36.5
Os01t0818100-00	Rice	mitochondrion	33.93	36.45
Bra000206.1-P	Field mustard	cytosol, nucleus, vacuole	36.94	36.39
CDY22482	Canola	mitochondrion	36.64	35.57
Zm00001d043082_P001	Maize	nucleus, peroxisome, plastid	33.33	35.24
AT2G40815.1	Thale cress	extracellular, plasma membrane, plastid	37.84	34.33
CDY22481	Canola	cytosol, extracellular, nucleus	22.52	33.48
CDY35439	Canola	extracellular, vacuole	33.33	33.33
Bra000205.1-P	Field mustard	extracellular	32.73	32.73

Protein Annotations

EMBL:ACUP02003480	EnsemblPlants:KRH53687	EnsemblPlantsGene:GLYMA_06G140100	EntrezGene:100816832	Gene3D:2.60.40.150	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF15	PFAM:PF00168
ProteinID:KRH53687	ProteinID:KRH53687.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00239	SUPFAM:SSF49562
UniParc:UPI00023C2A45	UniProt:K7KUZ2	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:11435599..11437202

Molecular Weight (calculated)

36843.6 Da

IEP (calculated)

5.661

GRAVY (calculated)

-0.430

Length

333 amino acids

Sequence
(BLAST)

001: MGIIWVEVCL ISAHGLQLST SLWKRQWFAV GWIDHNSKYC TKVVDSGRAN PVWRTKFVIP VDDSASNIQD LALNVEVYSI DPVFFTEKLH GSATVFLREF
101: LVMKVKNSEG SKPRQEEIGS YQLRKKKSSK PRGCIDILIR ISDKKKEPNS QSGNKEGILL LDDGDGTRLT IEEGIRQAYP QKPQVSIHQP EKDHVQTNVP
201: DYHSLPSTTT NYYDPYEGET SYHEVDEPSY REVAGPSYLL PRTITPPPPP PPSNVGYIPT FLPRNDGLSP SYREMSTSRA ALGQRVPAGV AMGLGAGALA
301: AGAVIFGDDF MSGFDVPPDL GDSGFNLEMD PPF

Best Arabidopsis Sequence Match ( AT2G40815.2 )
(BLAST)

001: MGKILVEICM ISARGLRVGI GIGSSLLKHQ WYAVGWLDPE DKYCTTIDAS RADNPVWRTK FATLLDDSTI QDSKLALQVE VYSREPLFLR KRLHGSATVS
101: LKEFLTKYKQ QQSSSKAVIE ETGSYQLRKT NSSKPQGFVD VSIRISAERE DFGGFTGDFG GVMLSNNSDY NTSGQDYMAG SSQYPFAPMD QSNPFSVPPS
201: YNHHSSMPNP PMTNTNPQMQ QPYYPPPMQP PPPPMNSGYM PTYIPNSENV TNIPSSSSSG GVPGGAGRGY ARTGPGFAVG VGAGAVVGAG AALYGSEFMS
301: GIDLPSSLPH PSVPISIDPP F

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4IIZ8]
SUBAcon: [plasma membrane,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.