CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000205.1-P	Field mustard	extracellular	97.0	97.0
CDY22480	Canola	vacuole	58.86	85.59
CDY35438	Canola	mitochondrion, nucleus, vacuole	68.47	67.66
CDY22482	Canola	mitochondrion	66.97	65.01
CDY22481	Canola	cytosol, extracellular, nucleus	41.44	61.61
AT2G40815.1	Thale cress	extracellular, plasma membrane, plastid	60.36	54.77
Solyc03g095300.2.1	Tomato	mitochondrion	21.92	50.69
VIT_13s0067g00140.t01	Wine grape	extracellular, mitochondrion, nucleus, plasma membrane	39.94	41.18
PGSC0003DMT400013484	Potato	cytosol, golgi, mitochondrion, nucleus	37.84	39.5
KRH16945	Soybean	mitochondrion	35.44	37.7
KRH72560	Soybean	mitochondrion	36.64	37.65
GSMUA_Achr7P21910_001	Banana	mitochondrion	34.53	35.94
TraesCS3A01G341500.1	Wheat	mitochondrion	33.03	35.26
TraesCS3B01G373600.1	Wheat	mitochondrion	32.73	34.94
TraesCS3D01G335200.1	Wheat	mitochondrion	32.43	34.62
KRH53687	Soybean	plasma membrane	33.33	33.33
KRH64243	Soybean	extracellular, plasma membrane	32.73	32.73
EES01658	Sorghum	mitochondrion	29.73	31.73
Os01t0818100-00	Rice	mitochondrion	28.53	30.65
Zm00001d043082_P001	Maize	nucleus, peroxisome, plastid	28.83	30.48

Protein Annotations

EnsemblPlants:CDY35439	EnsemblPlantsGene:GSBRNA2T00058438001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF15	PFAM:PF00168	ProteinID:CDY35439	ProteinID:CDY35439.1
SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0004EE56CB	UniProt:A0A078HDD0	MapMan:35.2

Description

BnaA03g19210DBnaA03g19210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDD0]

Coordinates

chrLK032351:+:362091..363345

Molecular Weight (calculated)

36423.7 Da

IEP (calculated)

7.122

GRAVY (calculated)

-0.649

Length

333 amino acids

Sequence
(BLAST)

001: MGKIFIEICL ISARQLLVGS GFGSSLLKHQ WFAVGWIDPE EKYCTTIDDS RSDNPLWRTK FISSLDDDGD SKIHALNVEV YSREPIFLTK KLHGSATVPL
101: KEFLAMYKNQ SSSSSVFEET RSYQLRKQNS SKAQGFVDVS VRVSAERQDF GGFTGDFGGV MLSNNSSYMA GSSQHPFASL NQPNNPNSFS APPNNHHSPM
201: PNFLTSNACP QMQQPYYPPP PMQQPYYPPP PPMEQPYYPS PPPMQQPYYP PPPMQQPYDP SAPMQPPPPP AGYMPSYMSR LENAVNVPSS SSSGGAGRGA
301: RPGPGLGAGA ASYGKDYISG AEPDGKFSGP YTK

Best Arabidopsis Sequence Match ( AT2G40815.1 )
(BLAST)

001: MGKILVEICM ISARGLRVGI GIGSSLLKHQ WYAVGWLDPE DKYCTTIDAS RADNPVWRTK FATLLDDSTI QDSKLALQVE VYSREPLFLR KRLHGSATVS
101: LKEFLTKYKQ QQSSSKAVIE ETGSYQLRKT NSSKPQGFVD VSIRISAERE DFGGFTGDFG GVMLSNNSDY NTSGQDYMAG SSQYPFAPMD QSNPFSVPPS
201: YNHHSSMPNP PMTNTNPQMQ QPYYPPPMQP PPPPMNSGYM PTYIPKSVND SSMPNPPMNN TNPQMQQPYY PPPMQPAPPP MNSGYMPTYI PNSENVTNIP
301: SSSSSGGVPG GAGRGYARTG PGFAVGVGAG AVVGAGAALY GSEFMSGIDL PSSLPHPSVP ISIDPPF

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4IIZ8]
SUBAcon: [plasma membrane,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.