CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043082_P001	Maize	nucleus, peroxisome, plastid	91.67	90.79
Os01t0818100-00	Rice	mitochondrion	69.87	70.32
TraesCS3D01G335200.1	Wheat	mitochondrion	70.19	70.19
TraesCS3B01G373600.1	Wheat	mitochondrion	70.19	70.19
TraesCS3A01G341500.1	Wheat	mitochondrion	69.87	69.87
Solyc03g095300.2.1	Tomato	mitochondrion	22.12	47.92
GSMUA_Achr7P21910_001	Banana	mitochondrion	47.12	45.94
VIT_13s0067g00140.t01	Wine grape	extracellular, mitochondrion, nucleus, plasma membrane	44.55	43.03
PGSC0003DMT400013484	Potato	cytosol, golgi, mitochondrion, nucleus	40.71	39.81
CDY22480	Canola	vacuole	29.17	39.74
KRH16945	Soybean	mitochondrion	37.82	37.7
KRH72560	Soybean	mitochondrion	38.78	37.35
CDY22481	Canola	cytosol, extracellular, nucleus	24.68	34.38
KRH53687	Soybean	plasma membrane	36.54	34.23
KRH64243	Soybean	extracellular, plasma membrane	36.54	34.23
Bra000206.1-P	Field mustard	cytosol, nucleus, vacuole	36.22	33.43
CDY35438	Canola	mitochondrion, nucleus, vacuole	35.9	33.23
CDY22482	Canola	mitochondrion	36.22	32.94
AT2G40815.1	Thale cress	extracellular, plasma membrane, plastid	35.26	29.97
CDY35439	Canola	extracellular, vacuole	31.73	29.73
Bra000205.1-P	Field mustard	extracellular	30.77	28.83

Protein Annotations

EnsemblPlants:EES01658	EnsemblPlantsGene:SORBI_3003G336300	EntrezGene:8055299	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF15	PFAM:PF00168	ProteinID:EES01658
ProteinID:EES01658.1	RefSeq:XP_002456538.1	SEG:seg	SUPFAM:SSF49562	UniParc:UPI0001A846E4	UniProt:C5XN87
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:65964241..65965659

Molecular Weight (calculated)

34242.0 Da

IEP (calculated)

6.422

GRAVY (calculated)

-0.546

Length

312 amino acids

Sequence
(BLAST)

001: MAKTSVEFCL ISARGLGRRS SLLKPQWFSV AWVDPNSKYC TKVDASGSSD PSWGMKFSVS VDEHDLSNLQ QMALTVEVYR REPIFLREHL QGSAVVQMNE
101: YFDKFEHGKE QPGVVEETAS FQLRRKKSDK AHGFVDVSIR IYKEQDVHAQ FSGSHDGSKH PNQVGITLAI EDGPVYNYPP LPSSHYRDHS KGDDRYSNTM
201: PTSPTTWPDP SLSGSNGYSN QPPLIPQTLP PPTSNLSYFP PYPTRGQVPQ SYINMPPRRF ADQNGSSNLG MGLGAGALAA GTLIFGENLL PEPNFGAGLD
301: GASLTLSSDA PF

Best Arabidopsis Sequence Match ( AT2G40815.1 )
(BLAST)

001: MGKILVEICM ISARGLRVGI GIGSSLLKHQ WYAVGWLDPE DKYCTTIDAS RADNPVWRTK FATLLDDSTI QDSKLALQVE VYSREPLFLR KRLHGSATVS
101: LKEFLTKYKQ QQSSSKAVIE ETGSYQLRKT NSSKPQGFVD VSIRISAERE DFGGFTGDFG GVMLSNNSDY NTSGQDYMAG SSQYPFAPMD QSNPFSVPPS
201: YNHHSSMPNP PMTNTNPQMQ QPYYPPPMQP PPPPMNSGYM PTYIPKSVND SSMPNPPMNN TNPQMQQPYY PPPMQPAPPP MNSGYMPTYI PNSENVTNIP
301: SSSSSGGVPG GAGRGYARTG PGFAVGVGAG AVVGAGAALY GSEFMSGIDL PSSLPHPSVP ISIDPPF

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4IIZ8]
SUBAcon: [plasma membrane,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.