Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G335200.1 | Wheat | mitochondrion | 97.76 | 97.76 |
| TraesCS3A01G341500.1 | Wheat | mitochondrion | 97.76 | 97.76 |
| Os01t0818100-00 | Rice | mitochondrion | 73.08 | 73.55 |
| EES01658 | Sorghum | mitochondrion | 70.19 | 70.19 |
| Zm00001d043082_P001 | Maize | nucleus, peroxisome, plastid | 69.55 | 68.89 |
| Solyc03g095300.2.1 | Tomato | mitochondrion | 24.36 | 52.78 |
| VIT_13s0067g00140.t01 | Wine grape | extracellular, mitochondrion, nucleus, plasma membrane | 48.72 | 47.06 |
| GSMUA_Achr7P21910_001 | Banana | mitochondrion | 47.44 | 46.25 |
| PGSC0003DMT400013484 | Potato | cytosol, golgi, mitochondrion, nucleus | 44.23 | 43.26 |
| CDY22480 | Canola | vacuole | 30.45 | 41.48 |
| KRH16945 | Soybean | mitochondrion | 36.86 | 36.74 |
| KRH72560 | Soybean | mitochondrion | 37.82 | 36.42 |
| KRH53687 | Soybean | plasma membrane | 38.14 | 35.74 |
| KRH64243 | Soybean | extracellular, plasma membrane | 38.14 | 35.74 |
| Bra000206.1-P | Field mustard | cytosol, nucleus, vacuole | 38.46 | 35.5 |
| CDY35438 | Canola | mitochondrion, nucleus, vacuole | 38.14 | 35.31 |
| CDY22482 | Canola | mitochondrion | 38.46 | 34.99 |
| AT2G40815.1 | Thale cress | extracellular, plasma membrane, plastid | 39.74 | 33.79 |
| CDY22481 | Canola | cytosol, extracellular, nucleus | 23.72 | 33.04 |
| CDY35439 | Canola | extracellular, vacuole | 34.94 | 32.73 |
| Bra000205.1-P | Field mustard | extracellular | 33.97 | 31.83 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G373600.1 | EnsemblPlantsGene:TraesCS3B01G373600 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF15 | PFAM:PF00168 | SEG:seg | SUPFAM:SSF49562 |
| TIGR:cd04051 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:586515472..586517224
Molecular Weight (calculated)
34258.2 Da
IEP (calculated)
6.796
GRAVY (calculated)
-0.569
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKISVEFCI ISARGLGRRS SLLKPQWFSV GWVDPNSKYC TKIDASGNSN ASWGTKFSVS VDGHDLAQQQ MELTVEVYRR EPIFLREHLQ GAAVVQMKEY
101: LDKFAQSEEH SEVIEETGSF QLRRKKSDKA HGFVDISIRI CKQEDDHGRF SGLPEGLKNS DQVGITLAIE DGPVYNYPPP PYNHYRGDRE DADHHSNSRP
201: VIPGTRPDPS PLESSYSYQP PMFPSTLPPP PTSNLGFFPP QHPGRERVPQ NYINVPPRKS AAQNSAPNFG MGLGAGALTA GTMIFGETLL PGPSFGGALN
301: GASLSVSNDA PF
101: LDKFAQSEEH SEVIEETGSF QLRRKKSDKA HGFVDISIRI CKQEDDHGRF SGLPEGLKNS DQVGITLAIE DGPVYNYPPP PYNHYRGDRE DADHHSNSRP
201: VIPGTRPDPS PLESSYSYQP PMFPSTLPPP PTSNLGFFPP QHPGRERVPQ NYINVPPRKS AAQNSAPNFG MGLGAGALTA GTMIFGETLL PGPSFGGALN
301: GASLSVSNDA PF
001: MGKILVEICM ISARGLRVGI GIGSSLLKHQ WYAVGWLDPE DKYCTTIDAS RADNPVWRTK FATLLDDSTI QDSKLALQVE VYSREPLFLR KRLHGSATVS
101: LKEFLTKYKQ QQSSSKAVIE ETGSYQLRKT NSSKPQGFVD VSIRISAERE DFGGFTGDFG GVMLSNNSDY NTSGQDYMAG SSQYPFAPMD QSNPFSVPPS
201: YNHHSSMPNP PMTNTNPQMQ QPYYPPPMQP PPPPMNSGYM PTYIPNSENV TNIPSSSSSG GVPGGAGRGY ARTGPGFAVG VGAGAVVGAG AALYGSEFMS
301: GIDLPSSLPH PSVPISIDPP F
101: LKEFLTKYKQ QQSSSKAVIE ETGSYQLRKT NSSKPQGFVD VSIRISAERE DFGGFTGDFG GVMLSNNSDY NTSGQDYMAG SSQYPFAPMD QSNPFSVPPS
201: YNHHSSMPNP PMTNTNPQMQ QPYYPPPMQP PPPPMNSGYM PTYIPNSENV TNIPSSSSSG GVPGGAGRGY ARTGPGFAVG VGAGAVVGAG AALYGSEFMS
301: GIDLPSSLPH PSVPISIDPP F
Arabidopsis Description
Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4IIZ8]
SUBAcon: [plasma membrane,plastid,extracellular]
SUBAcon: [plasma membrane,plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.